RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 CCDC186Q7Z3E2 898 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 MRFAP1L1Q96HT8 127 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 TEPSINQ96N21 525 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 MKNK2Q9HBH9 465 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 CABP5Q9NP86 173 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 VPS54Q9P1Q0 977 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 PLEKHA8P1O95397 391 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 RASA1P20936 1047 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 KIF5BP33176 963 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 FUT2Q10981 343 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 NR5A1Q13285 461 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 TNFAIP1Q13829 316 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 PKN1Q16512 942 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 DPCR1Q3MIW9 517 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 MIGA2Q7L4E1 593 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 PHF20Q9BVI0 1012 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 KAT14Q9H8E8 782 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 MYH8P13535 1937 aa13.04□□□□□ -0.32
CLUHP3-201ENST00000254109 COL2A1P02458 1487 aaPredicted RBP13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 A0A087WWV3 80 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 ADM5C9JUS6 153 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 BIN1O00499 593 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 PTPREP23469 700 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 SHMT1P34896 483 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 TFAP4Q01664 338 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 ELOA2Q8IYF1 753 aaPredicted RBP13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 DCPSQ96C86 337 aaKnown RBP13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 EHD4Q9H223 541 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 KCNF1Q9H3M0 494 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
CLUHP3-201ENST00000254109 TRIM75PA6NK02 468 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 NMT2O60551 498 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 BMP15O95972 392 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 KRBA2Q6ZNG9 492 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 DGKHQ86XP1 1220 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 ZNF444Q8N0Y2 327 aaPredicted RBP13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 KIAA1524Q8TCG1 905 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 OXER1Q8TDS5 423 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 TUBE1Q9UJT0 475 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 PCDHB6Q9Y5E3 794 aa13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.32
CLUHP3-201ENST00000254109 VEGFAP15692 232 aaPredicted RBP13.02□□□□□ -0.33
CLUHP3-201ENST00000254109 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
CLUHP3-201ENST00000254109 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.33
CLUHP3-201ENST00000254109 LONRF3Q496Y0 759 aa13.02□□□□□ -0.33
CLUHP3-201ENST00000254109 CCDC34Q96HJ3 373 aa13.02□□□□□ -0.33
CLUHP3-201ENST00000254109 TRIM34Q9BYJ4 488 aa13.02□□□□□ -0.33
CLUHP3-201ENST00000254109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.02□□□□□ -0.338e-17■□□□□ 8.7
CLUHP3-201ENST00000254109 MORC2Q9Y6X9 1032 aaPredicted RBP13.02□□□□□ -0.33
CLUHP3-201ENST00000254109 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 AKR1B1P15121 316 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 KRT26Q7Z3Y9 468 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 PNMA8AQ86V59 439 aaPredicted RBP13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 METTL16Q86W50 562 aaKnown RBP13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 SRBD1Q8N5C6 995 aaKnown RBP13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 SWAP70Q9UH65 585 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 NRBP1Q9UHY1 535 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 FZD1Q9UP38 647 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 CNTNAP5Q8WYK1 1306 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 PITPNM2Q9BZ72 1349 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 MYH6P13533 1939 aa13.01□□□□□ -0.33
CLUHP3-201ENST00000254109 NEMFO60524 1076 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 TSPY3P0CV98 308 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 TSPY8P0CW00 308 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 SCG2P13521 617 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 GNAQP50148 359 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 NLRP5P59047 1200 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 PNOCQ13519 176 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 KANK3Q6NY19 840 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 SULF1Q8IWU6 871 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 ANKS1AQ92625 1134 aa13□□□□□ -0.33
CLUHP3-201ENST00000254109 GLIS2Q9BZE0 524 aaPredicted RBP13□□□□□ -0.33
CLUHP3-201ENST00000254109 IKBKBO14920 756 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 GDF11O95390 407 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 JAG1P78504 1218 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 PFKFB3Q16875 520 aaPredicted RBP12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 TATDN1Q6P1N9 297 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 C17orf53Q8N3J3 647 aaPredicted RBP12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 ZC3H15Q8WU90 426 aaKnown RBP12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
CLUHP3-201ENST00000254109 HERC5Q9UII4 1024 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms