RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CCDC196A0A1B0GTZ2 297 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 KLRF2D3W0D1 207 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 PFKFB2O60825 505 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
VPS25-201ENST00000253794 METAP2P50579 478 aaKnown RBP eCLIP16.43■□□□□ 0.22
VPS25-201ENST00000253794 FUT2Q10981 343 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
VPS25-201ENST00000253794 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
VPS25-201ENST00000253794 TTBK2Q6IQ55 1244 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 POTEEQ6S8J3 1075 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 TMTC3Q6ZXV5 915 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 REPS2Q8NFH8 660 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 MTMR8Q96EF0 704 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 RIOX1Q9H6W3 641 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 WBP1LQ9NX94 342 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 RNF186Q9NXI6 227 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 MORF4L1Q9UBU8 362 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 LIMCH1Q9UPQ0 1083 aa16.43■□□□□ 0.22
VPS25-201ENST00000253794 FRMPD2Q68DX3 1309 aaPredicted RBP16.43■□□□□ 0.22
VPS25-201ENST00000253794 VWA5AO00534 786 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 ATP2A1O14983 1001 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 TLR2O60603 784 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 GOLGA8HP0CJ92 632 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 CYP2C8P10632 490 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 RXRAP19793 462 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 RTN1Q16799 776 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 SLC35G1Q2M3R5 365 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 SYDE2Q5VT97 1194 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 ZSCAN31Q96LW9 406 aaPredicted RBP16.42■□□□□ 0.22
VPS25-201ENST00000253794 RANBP17Q9H2T7 1088 aaKnown RBP16.42■□□□□ 0.22
VPS25-201ENST00000253794 SLC38A10Q9HBR0 1119 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 GPCPD1Q9NPB8 672 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 PRR12Q9ULL5 1215 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 RABGAP1Q9Y3P9 1069 aa16.42■□□□□ 0.22
VPS25-201ENST00000253794 CD2BP2O95400 341 aaKnown RBP16.41■□□□□ 0.22
VPS25-201ENST00000253794 BCRP11274 1271 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 CDC27P30260 824 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 OAZ1P54368 228 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 CRHR2Q13324 411 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 NTRK3Q16288 839 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 ME3Q16798 604 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 C17orf99Q6UX52 265 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 GTF3C6Q969F1 213 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 SNX21Q969T3 373 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
VPS25-201ENST00000253794 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
VPS25-201ENST00000253794 CYTH3O43739 400 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 CNMDO75829 334 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 IFNAR1P17181 557 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 SLC16A2P36021 539 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 FAM110CQ1W6H9 321 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 NBPF11Q86T75 865 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 ADGRF4Q8IZF3 695 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
VPS25-201ENST00000253794 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
VPS25-201ENST00000253794 KIFC2Q96AC6 838 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 JMJD4Q9H9V9 463 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
VPS25-201ENST00000253794 ZNF214Q9UL59 606 aaPredicted RBP16.4■□□□□ 0.22
VPS25-201ENST00000253794 LARGE1O95461 756 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
VPS25-201ENST00000253794 SCRN1Q12765 414 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 RAB11FIP4Q86YS3 637 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 CCDC144CPQ8IYA2 1237 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 LARP6Q9BRS8 491 aaKnown RBP16.39■□□□□ 0.21
VPS25-201ENST00000253794 UBA5Q9GZZ9 404 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
VPS25-201ENST00000253794 PNMA2Q9UL42 364 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 ZNF536O15090 1300 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 CNTNAP5Q8WYK1 1306 aa16.39■□□□□ 0.21
VPS25-201ENST00000253794 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
VPS25-201ENST00000253794 ZBED4O75132 1171 aa16.38■□□□□ 0.21
VPS25-201ENST00000253794 TRPA1O75762 1119 aa16.38■□□□□ 0.21
VPS25-201ENST00000253794 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
VPS25-201ENST00000253794 TMEM132BQ14DG7 1078 aa16.38■□□□□ 0.21
VPS25-201ENST00000253794 CPVLQ9H3G5 476 aa16.38■□□□□ 0.21
VPS25-201ENST00000253794 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
VPS25-201ENST00000253794 BTBD7Q9P203 1132 aa16.38■□□□□ 0.21
VPS25-201ENST00000253794 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
VPS25-201ENST00000253794 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
VPS25-201ENST00000253794 ZBTB5O15062 677 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 ICAM1P05362 532 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 ERVK-9P63128 1117 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 ERVK-24P63145 666 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 ST3GAL1Q11201 340 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.37■□□□□ 0.21
VPS25-201ENST00000253794 SHCBP1Q8NEM2 672 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 TEX13BQ9BXU2 312 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 RNF26Q9BY78 433 aaPredicted RBP16.37■□□□□ 0.21
VPS25-201ENST00000253794 R3HDMLQ9H3Y0 253 aa16.37■□□□□ 0.21
VPS25-201ENST00000253794 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
VPS25-201ENST00000253794 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
VPS25-201ENST00000253794 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms