RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CBFA2T2O43439 604 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 ECE2O60344 883 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 HEATR3Q7Z4Q2 680 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 VSTM4Q8IW00 320 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 TRIML1Q8N9V2 468 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 FAM163AQ96GL9 167 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 SAMSN1Q9NSI8 373 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 TCP11L1Q9NUJ3 509 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 TTF2Q9UNY4 1162 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 CD44P16070 742 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 ZNF18P17022 549 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 POLD1P28340 1107 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 CDC25AP30304 524 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 PCDHA4Q9UN74 947 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 SUGT1Q9Y2Z0 365 aa21.26■□□□□ 0.99
PDLIM4-201ENST00000253754 PTPN14Q15678 1187 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 KLHL10Q6JEL2 608 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 C16orf86Q6ZW13 317 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 ENOX1Q8TC92 643 aaKnown RBP21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 ARID3AQ99856 593 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 GAKO14976 1311 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 CALML3P27482 149 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 TRAPPC10P48553 1259 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 SCNN1DP51172 638 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 DPYDQ12882 1025 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 BLZF1Q9H2G9 400 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 DACH1Q9UI36 760 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 DAGLAQ9Y4D2 1042 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 SCN9AQ15858 1988 aa21.25■□□□□ 0.99
PDLIM4-201ENST00000253754 DDX60LQ5H9U9 1706 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 STX17P56962 302 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 E2F4Q16254 413 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 PDCL3Q9H2J4 239 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 PALM3A6NDB9 673 aaPredicted RBP21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 TOP1P11387 765 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 CDK11BP21127 795 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 C4orf32Q8N8J7 132 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 SUPT20HQ8NEM7 779 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 PCDHA6Q9UN73 950 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 PCDHA8Q9Y5H6 950 aa21.24■□□□□ 0.99
PDLIM4-201ENST00000253754 M0R2N6 131 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 STXBP3O00186 592 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 PPIP5K2O43314 1243 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 PLCG2P16885 1265 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 PTGER2P43116 358 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 CCDC93Q567U6 631 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 MTRQ99707 1265 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 SH3GLB2Q9NR46 395 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 CDK5RAP2Q96SN8 1893 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 KIF13BQ9NQT8 1826 aa21.23■□□□□ 0.99
PDLIM4-201ENST00000253754 MYO1BO43795 1136 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 COBLO75128 1261 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 GNAQP50148 359 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 PICALMQ13492 652 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 CCDC178Q5BJE1 867 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 USP17L2Q6R6M4 530 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 CEP95Q96GE4 821 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 PPP1R13BQ96KQ4 1090 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 KLRF2D3W0D1 207 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 INF2Q27J81 1249 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 STRIP1Q5VSL9 837 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 RTKN2Q8IZC4 609 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 KCND1Q9NSA2 647 aa21.22■□□□□ 0.99
PDLIM4-201ENST00000253754 CTIFO43310 598 aaKnown RBP21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 PDXDC2PQ6P474 469 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 HOMER1Q86YM7 354 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 KIAA0825Q8IV33 1275 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 BARHL2Q9NY43 387 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 PAXBP1Q9Y5B6 917 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 CCDC194A0A1B0GVG4 234 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 TGFB2P61812 414 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 CUL4BQ13620 913 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 CCDC112Q8NEF3 446 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 NEDD1Q8NHV4 660 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 CCDC34Q96HJ3 373 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 SGIP1Q9BQI5 828 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 TMEM60Q9H2L4 133 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 ZNF287Q9HBT7 754 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 PIM2Q9P1W9 311 aa21.21■□□□□ 0.99
PDLIM4-201ENST00000253754 PP2D1A8MPX8 630 aa21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 ERCC5P28715 1186 aaPredicted RBP21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 NT5C2P49902 561 aa21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 DACT2Q5SW24 774 aa21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 IQUBQ8NA54 791 aa21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 NAA30Q147X3 362 aaPredicted RBP21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 KARSQ15046 597 aaKnown RBP21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 GRIPAP1Q4V328 841 aa21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 GSDMAQ96QA5 445 aa21.2■□□□□ 0.98
PDLIM4-201ENST00000253754 SYNRGQ9UMZ2 1314 aa21.19■□□□□ 0.98
PDLIM4-201ENST00000253754 PPP1R3GB7ZBB8 358 aa21.19■□□□□ 0.98
PDLIM4-201ENST00000253754 TEKT1Q969V4 418 aa21.19■□□□□ 0.98
PDLIM4-201ENST00000253754 ZMYND15Q9H091 742 aa21.19■□□□□ 0.98
PDLIM4-201ENST00000253754 VAT1LQ9HCJ6 419 aa21.19■□□□□ 0.98
PDLIM4-201ENST00000253754 PARP1P09874 1014 aaKnown RBP21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 CLEC10AQ8IUN9 316 aa21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 TMX1Q9H3N1 280 aa21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 ZNF277Q9NRM2 450 aaPredicted RBP21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 YDJCA8MPS7 323 aa21.18■□□□□ 0.98
PDLIM4-201ENST00000253754 USP17L5A8MUK1 530 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms