RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 NARFQ9UHQ1 456 aa4.68□□□□□ -1.66
UBE4A-201ENST00000252108 PRR29P0C7W0 189 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ZBTB48P10074 688 aaPredicted RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 LMOD1P29536 600 aaPredicted RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 PAFAH1B1P43034 410 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ATP2C1P98194 919 aaPredicted RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 GABPAQ06546 454 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 SPA17Q15506 151 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 SRGAP1Q7Z6B7 1085 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 KIAA1328Q86T90 577 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CELF1Q92879 486 aaKnown RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ALS2CR12Q96Q35 445 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 TOMM22Q9NS69 142 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 PPP2R2CQ9Y2T4 447 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ZC3H4Q9UPT8 1303 aaKnown RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 A0A1B0GVL5 298 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 VWA3AA6NCI4 1184 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 B4E1Z4 1266 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 BHMG1C9JSJ3 638 aaPredicted RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CYTH3O43739 400 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 KRT86O43790 486 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 IL1R1P14778 569 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC178Q5BJE1 867 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CYP26C1Q6V0L0 522 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 FAM205AQ6ZU69 1335 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 TMTC3Q6ZXV5 915 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC91Q7Z6B0 441 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ARFGAP2Q8N6H7 521 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ENOX1Q8TC92 643 aaKnown RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 MTMR8Q96EF0 704 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ERLIN2O94905 339 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ATP1A3P13637 1013 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ACTN2P35609 894 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 TMEM132AQ24JP5 1023 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ERCC6LQ2NKX8 1250 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ERFEQ4G0M1 354 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC181Q5TID7 509 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 TBC1D9BQ66K14 1250 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ZNF662Q6ZS27 426 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ZC3H3Q8IXZ2 948 aaKnown RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 FERMT2Q96AC1 680 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 LRRC27Q9C0I9 530 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 GNL3LQ9NVN8 582 aaKnown RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CDC23Q9UJX2 597 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ADAMTS2O95450 1211 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 HOXA10P31260 410 aaPredicted RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 CLCN6P51797 869 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 GTF2A1P52655 376 aaPredicted RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 PPARAQ07869 468 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 MAP3K12Q12852 859 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 KMT5BQ4FZB7 885 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 DNAJC21Q5F1R6 531 aaKnown RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 FKBP15Q5T1M5 1219 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 FOXR2Q6PJQ5 311 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 PCMTD1Q96MG8 357 aaPredicted RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 TACO1Q9BSH4 297 aaKnown RBP4.67□□□□□ -1.66
UBE4A-201ENST00000252108 UBAC1Q9BSL1 405 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 KCNH3Q9ULD8 1083 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 PCDHB6Q9Y5E3 794 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 ITIH6Q6UXX5 1313 aa4.67□□□□□ -1.66
UBE4A-201ENST00000252108 RNF225M0QZC1 329 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 EBAG9O00559 213 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 MBD4O95243 580 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 SLFN14P0C7P3 912 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 POLD1P28340 1107 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 RHBDL3P58872 404 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 HAND2P61296 217 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 CTDSPL2Q05D32 466 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 RSRC2Q7L4I2 434 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 AFAP1L1Q8TED9 768 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 DCP1AQ9NPI6 582 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 IRX3P78415 501 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC50Q8IVM0 306 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 DHX37Q8IY37 1157 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 SRBD1Q8N5C6 995 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 ZNF507Q8TCN5 953 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 IPO4Q8TEX9 1081 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 HNRNPLLQ8WVV9 542 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 RTFDC1Q9BY42 306 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 TSKSQ9UJT2 592 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 PARP3Q9Y6F1 533 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 RPS6KA4O75676 772 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 CLK2P49760 499 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 FANCBQ8NB91 859 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 TSC1Q92574 1164 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 PHKBQ93100 1093 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 ARMT1Q9H993 441 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 RBM28Q9NW13 759 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 MAD2L2Q9UI95 211 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 MAN1B1Q9UKM7 699 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 PALM3A6NDB9 673 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 TRIM75PA6NK02 468 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 BIN1O00499 593 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 PES1O00541 588 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 AMPD3Q01432 767 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 TMEM67Q5HYA8 995 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 METTL24Q5JXM2 366 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 EFCAB13Q8IY85 973 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC155Q8N6L0 562 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 NAPBQ9H115 298 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms