RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 NAPAP54920 295 aa24.6■■□□□ 1.53
CLN6-201ENST00000249806 EIF6P56537 245 aaKnown RBP24.6■■□□□ 1.53
CLN6-201ENST00000249806 STX17P56962 302 aa24.6■■□□□ 1.53
CLN6-201ENST00000249806 GABPAQ06546 454 aa24.6■■□□□ 1.53
CLN6-201ENST00000249806 E4F1Q66K89 784 aaPredicted RBP24.6■■□□□ 1.53
CLN6-201ENST00000249806 GALNT17Q6IS24 598 aa24.6■■□□□ 1.53
CLN6-201ENST00000249806 KCNQ5Q9NR82 932 aa24.6■■□□□ 1.53
CLN6-201ENST00000249806 USP40Q9NVE5 1235 aa24.6■■□□□ 1.53
CLN6-201ENST00000249806 SUGT1Q9Y2Z0 365 aa24.6■■□□□ 1.53
CLN6-201ENST00000249806 AKR1B1P15121 316 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 LONP1P36776 959 aaKnown RBP24.59■■□□□ 1.53
CLN6-201ENST00000249806 CLEC10AQ8IUN9 316 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 ZNF592Q92610 1267 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 PIGSQ96S52 555 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 ZMYND12Q9H0C1 365 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 PDE6BP35913 854 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 CUL4BQ13620 913 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 HSP90AA2PQ14568 343 aaPredicted RBP24.59■■□□□ 1.53
CLN6-201ENST00000249806 CEP135Q66GS9 1140 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 NYAP1Q6ZVC0 841 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 MTMR4Q9NYA4 1195 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 PARP3Q9Y6F1 533 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 NRXN2Q9P2S2 1712 aa24.59■■□□□ 1.53
CLN6-201ENST00000249806 G3V3G9 751 aa24.58■■□□□ 1.53
CLN6-201ENST00000249806 KARSQ15046 597 aaKnown RBP24.58■■□□□ 1.53
CLN6-201ENST00000249806 PTPN14Q15678 1187 aa24.58■■□□□ 1.53
CLN6-201ENST00000249806 DCAF8Q5TAQ9 597 aa24.58■■□□□ 1.53
CLN6-201ENST00000249806 RRP36Q96EU6 259 aaKnown RBP24.58■■□□□ 1.53
CLN6-201ENST00000249806 FRMPD2Q68DX3 1309 aaPredicted RBP24.58■■□□□ 1.53
CLN6-201ENST00000249806 SMCO2A6NFE2 343 aa24.58■■□□□ 1.52
CLN6-201ENST00000249806 PP2D1A8MPX8 630 aa24.58■■□□□ 1.52
CLN6-201ENST00000249806 DTHD1Q6ZMT9 781 aa24.58■■□□□ 1.52
CLN6-201ENST00000249806 LRRC47Q8N1G4 583 aaKnown RBP24.58■■□□□ 1.52
CLN6-201ENST00000249806 ZNF622Q969S3 477 aaKnown RBP eCLIP24.58■■□□□ 1.52
CLN6-201ENST00000249806 MASTLQ96GX5 879 aa24.58■■□□□ 1.52
CLN6-201ENST00000249806 PPP1R3GB7ZBB8 358 aa24.57■■□□□ 1.52
CLN6-201ENST00000249806 PDHBP11177 359 aa24.57■■□□□ 1.52
CLN6-201ENST00000249806 DBNDD1Q9H9R9 158 aa24.57■■□□□ 1.52
CLN6-201ENST00000249806 KCND1Q9NSA2 647 aa24.57■■□□□ 1.52
CLN6-201ENST00000249806 SLURP2P0DP57 97 aa24.57■■□□□ 1.52
CLN6-201ENST00000249806 CDC42EP5Q6NZY7 148 aa24.57■■□□□ 1.52
CLN6-201ENST00000249806 SEC63Q9UGP8 760 aaKnown RBP24.57■■□□□ 1.52
CLN6-201ENST00000249806 ADAMTSL1Q8N6G6 1762 aa24.57■■□□□ 1.52
CLN6-201ENST00000249806 COL11A2P13942 1736 aaPredicted RBP24.56■■□□□ 1.52
CLN6-201ENST00000249806 HMGB2P26583 209 aaKnown RBP24.56■■□□□ 1.52
CLN6-201ENST00000249806 RRP9O43818 475 aaKnown RBP24.55■■□□□ 1.52
CLN6-201ENST00000249806 COBLO75128 1261 aa24.55■■□□□ 1.52
CLN6-201ENST00000249806 APOBEC3HQ6NTF7 200 aaKnown RBP24.55■■□□□ 1.52
CLN6-201ENST00000249806 TMX4Q9H1E5 349 aaPredicted RBP24.55■■□□□ 1.52
CLN6-201ENST00000249806 SERPINB13Q9UIV8 391 aa24.55■■□□□ 1.52
CLN6-201ENST00000249806 DHX8Q14562 1220 aaKnown RBP24.55■■□□□ 1.52
CLN6-201ENST00000249806 SPATA1Q5VX52 437 aa24.55■■□□□ 1.52
CLN6-201ENST00000249806 PYM1Q9BRP8 204 aaKnown RBP24.55■■□□□ 1.52
CLN6-201ENST00000249806 C6orf50Q9HD87 102 aa24.55■■□□□ 1.52
CLN6-201ENST00000249806 MYH8P13535 1937 aa24.55■■□□□ 1.52
CLN6-201ENST00000249806 SYNRGQ9UMZ2 1314 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 TXLNAP40222 546 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 NFIAQ12857 509 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 LETM2Q2VYF4 491 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 CCDC12Q8WUD4 166 aaPredicted RBP24.54■■□□□ 1.52
CLN6-201ENST00000249806 RIOX1Q9H6W3 641 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 PAXBP1Q9Y5B6 917 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 GTPBP6O43824 516 aaPredicted RBP24.54■■□□□ 1.52
CLN6-201ENST00000249806 SMARCA1P28370 1054 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 STAT6P42226 847 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 CT47A1Q5JQC4 288 aaPredicted RBP24.54■■□□□ 1.52
CLN6-201ENST00000249806 PLIN2Q99541 437 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 TMX1Q9H3N1 280 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 DISC1Q9NRI5 854 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 PCDHAC2Q9Y5I4 1007 aa24.54■■□□□ 1.52
CLN6-201ENST00000249806 PLIN4Q96Q06 1357 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 NRDCO43847 1150 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 GNA11P29992 359 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 NR1I3Q14994 352 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 NAALADL2Q58DX5 795 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 TEKT1Q969V4 418 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 PPP1R13BQ96KQ4 1090 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 BIN2Q9UBW5 565 aaPredicted RBP24.53■■□□□ 1.52
CLN6-201ENST00000249806 QSER1Q2KHR3 1735 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 IGKV6D-41A0A0C4DH26 115 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 CCNT1O60563 726 aaKnown RBP24.53■■□□□ 1.52
CLN6-201ENST00000249806 SHMT1P34896 483 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 TBX2Q13207 712 aaPredicted RBP24.53■■□□□ 1.52
CLN6-201ENST00000249806 SOGA3Q5TF21 947 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 HHIPL2Q6UWX4 724 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 APTXQ7Z2E3 356 aaKnown RBP24.53■■□□□ 1.52
CLN6-201ENST00000249806 ZFPM1Q8IX07 1006 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 ZNF710Q8N1W2 664 aa24.53■■□□□ 1.52
CLN6-201ENST00000249806 ZNF219Q9P2Y4 722 aaPredicted RBP24.53■■□□□ 1.52
CLN6-201ENST00000249806 NONOQ15233 471 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■□□ 16.1
CLN6-201ENST00000249806 RRAGBQ5VZM2 374 aa24.52■■□□□ 1.52
CLN6-201ENST00000249806 SPECC1LQ69YQ0 1117 aa24.52■■□□□ 1.52
CLN6-201ENST00000249806 RASSF8Q8NHQ8 419 aa24.52■■□□□ 1.52
CLN6-201ENST00000249806 COA7Q96BR5 231 aa24.52■■□□□ 1.52
CLN6-201ENST00000249806 GPCPD1Q9NPB8 672 aa24.52■■□□□ 1.52
CLN6-201ENST00000249806 CTNND2Q9UQB3 1225 aa24.52■■□□□ 1.52
CLN6-201ENST00000249806 UBA7P41226 1012 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 JAKMIP3Q5VZ66 844 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 KRT25Q7Z3Z0 450 aa24.51■■□□□ 1.51
CLN6-201ENST00000249806 FAM177A1Q8N128 213 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms