RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 MIGA1Q8NAN2 632 aa16.83■□□□□ 0.28
PMPCB-201ENST00000249269 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
PMPCB-201ENST00000249269 PANX2Q96RD6 677 aa16.83■□□□□ 0.28
PMPCB-201ENST00000249269 KMT5AQ9NQR1 393 aa16.83■□□□□ 0.28
PMPCB-201ENST00000249269 DCAF16Q9NXF7 216 aa16.83■□□□□ 0.28
PMPCB-201ENST00000249269 ZMAT5Q9UDW3 170 aaKnown RBP16.83■□□□□ 0.28
PMPCB-201ENST00000249269 FER1L4A9Z1Z3 1794 aa16.83■□□□□ 0.28
PMPCB-201ENST00000249269 NID2Q14112 1375 aa16.83■□□□□ 0.28
PMPCB-201ENST00000249269 VWA3AA6NCI4 1184 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 PTPAQ15257 358 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 KIF4BQ2VIQ3 1234 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 SPECC1LQ69YQ0 1117 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 TTC5Q8N0Z6 440 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 APPBP2Q92624 585 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 SEL1LQ9UBV2 794 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 ATRNO75882 1429 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 KLF18A0A0U1RQI7 1052 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 CYP11B2P19099 503 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 ERCC5P28715 1186 aaPredicted RBP16.82■□□□□ 0.28
PMPCB-201ENST00000249269 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
PMPCB-201ENST00000249269 PACS1Q6VY07 963 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 TMEM87BQ96K49 555 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
PMPCB-201ENST00000249269 SEMA3EO15041 775 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 TBC1D8O95759 1140 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 PHKG2P15735 406 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 IBSPP21815 317 aaPredicted RBP16.81■□□□□ 0.28
PMPCB-201ENST00000249269 TXLNAP40222 546 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 PPP2R3AQ06190 1150 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 CCDC51Q96ER9 411 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 UTP14AQ9BVJ6 771 aaKnown RBP16.81■□□□□ 0.28
PMPCB-201ENST00000249269 CARD6Q9BX69 1037 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 GBP3Q9H0R5 595 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 CASS4Q9NQ75 786 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 NUP188Q5SRE5 1749 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 NWD2Q9ULI1 1742 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 RNASEH2AO75792 299 aaKnown RBP16.81■□□□□ 0.28
PMPCB-201ENST00000249269 RPL17P18621 184 aaKnown RBP16.81■□□□□ 0.28
PMPCB-201ENST00000249269 SMC1AQ14683 1233 aaKnown RBP16.81■□□□□ 0.28
PMPCB-201ENST00000249269 CCBE1Q6UXH8 406 aaPredicted RBP16.81■□□□□ 0.28
PMPCB-201ENST00000249269 NUTM2AQ8IVF1 878 aaPredicted RBP16.81■□□□□ 0.28
PMPCB-201ENST00000249269 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 CCDC191Q8NCU4 936 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 ZFPM2Q8WW38 1151 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 EXOC1Q9NV70 894 aa16.81■□□□□ 0.28
PMPCB-201ENST00000249269 PRSS47A8MTI9 375 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 ERLIN1O75477 346 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 ZNF18P17022 549 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
PMPCB-201ENST00000249269 TPP2P29144 1249 aaPredicted RBP16.8■□□□□ 0.28
PMPCB-201ENST00000249269 HNRNPH2P55795 449 aaKnown RBP16.8■□□□□ 0.28
PMPCB-201ENST00000249269 MAPRE1Q15691 268 aaKnown RBP16.8■□□□□ 0.28
PMPCB-201ENST00000249269 HELQQ8TDG4 1101 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 KCNN1Q92952 543 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 LMCD1Q9NZU5 365 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 C6orf203Q9P0P8 240 aaPredicted RBP16.8■□□□□ 0.28
PMPCB-201ENST00000249269 MAP2K7O14733 419 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 RPS6KA5O75582 802 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 IVLP07476 585 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 RCAN1P53805 252 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 GUCY1B3Q02153 619 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 PDXDC1Q6P996 788 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.8■□□□□ 0.281e-6■■■■□ 20.5
PMPCB-201ENST00000249269 UBAP1Q9NZ09 502 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 MYO1AQ9UBC5 1043 aa16.8■□□□□ 0.28
PMPCB-201ENST00000249269 ANGEL1Q9UNK9 670 aaKnown RBP16.8■□□□□ 0.28
PMPCB-201ENST00000249269 ZNF213O14771 459 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
PMPCB-201ENST00000249269 MYL6BP14649 208 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 KIFC2Q96AC6 838 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 TBK1Q9UHD2 729 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 RAB21Q9UL25 225 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 POU5F1BQ06416 359 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 KRT72Q14CN4 511 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 PAF1Q8N7H5 531 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 TMEM165Q9HC07 324 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 COL4A3BPQ9Y5P4 624 aa16.79■□□□□ 0.28
PMPCB-201ENST00000249269 TJP1Q07157 1748 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 TSPAN7P41732 249 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 SARSP49591 514 aaKnown RBP16.78■□□□□ 0.28
PMPCB-201ENST00000249269 MDM2Q00987 491 aaPredicted RBP16.78■□□□□ 0.28
PMPCB-201ENST00000249269 PARP10Q53GL7 1025 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 CCDC65Q8IXS2 484 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
PMPCB-201ENST00000249269 CNNM3Q8NE01 707 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
PMPCB-201ENST00000249269 CTAGE1Q96RT6 745 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 FUT8Q9BYC5 575 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.78■□□□□ 0.28
PMPCB-201ENST00000249269 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 MROH7-TTC4A0A0A0MT08 1334 aa16.78■□□□□ 0.28
PMPCB-201ENST00000249269 M0R2C6 588 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms