RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 TCHHQ07283 1943 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 DCAF8L1A6NGE4 600 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 TRIM66O15016 1216 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 FAM13AO94988 1023 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 RAPGEF1Q13905 1077 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 MTF1Q14872 753 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 GBP6Q6ZN66 633 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 LRRN4CLQ8ND94 238 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 SNX29Q8TEQ0 813 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 DYDC1Q8WWB3 177 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 FERMT2Q96AC1 680 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 FAM212AQ96EL1 285 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 CCDC114Q96M63 670 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 MRFAP1Q9Y605 127 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 FHOD1Q9Y613 1164 aa10.32□□□□□ -0.76
COL21A1-201ENST00000244728 FOXN1O15353 648 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 PPIP5K2O43314 1243 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 CIAO1O76071 339 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 CTDNEP1O95476 244 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 NF2P35240 595 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 BTDP43251 543 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 KCNJ6P48051 423 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 HERC4Q5GLZ8 1057 aaPredicted RBP10.31□□□□□ -0.76
COL21A1-201ENST00000244728 CCDC121Q6ZUS5 278 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 B4GALNT4Q76KP1 1039 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 HAUS4Q9H6D7 363 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 STK32BQ9NY57 414 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 NRKQ7Z2Y5 1582 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 BACH1O14867 736 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 PPFIA1Q13136 1202 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 UBE4AQ14139 1066 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 SCARF1Q14162 830 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 TTC19Q6DKK2 380 aaPredicted RBP10.31□□□□□ -0.76
COL21A1-201ENST00000244728 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 DYNLL2Q96FJ2 89 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 PPLO60437 1756 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 ZNF609O15014 1411 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 DEPDC5O75140 1603 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 ARHGEF28Q8N1W1 1705 aaKnown RBP10.31□□□□□ -0.76
COL21A1-201ENST00000244728 BICDL2A1A5D9 508 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 USP17L8P0C7I0 530 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 RESP18Q5W5W9 173 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 NSMFQ6X4W1 530 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 POTEDQ86YR6 584 aa10.31□□□□□ -0.76
COL21A1-201ENST00000244728 REXO1Q8N1G1 1221 aaKnown RBP10.31□□□□□ -0.76
COL21A1-201ENST00000244728 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
COL21A1-201ENST00000244728 CALRP27797 417 aaKnown RBP10.3□□□□□ -0.76
COL21A1-201ENST00000244728 COPB1P53618 953 aaKnown RBP10.3□□□□□ -0.76
COL21A1-201ENST00000244728 EXOSC10Q01780 885 aaKnown RBP10.3□□□□□ -0.76
COL21A1-201ENST00000244728 SEPT7Q16181 437 aaKnown RBP10.3□□□□□ -0.76
COL21A1-201ENST00000244728 SHC4Q6S5L8 630 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 TICAM2Q86XR7 235 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 GPR108Q9NPR9 543 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 JRKLQ9Y4A0 524 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 HARSP12081 509 aaKnown RBP10.3□□□□□ -0.76
COL21A1-201ENST00000244728 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 PTGDRQ13258 359 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 HS2ST1Q7LGA3 356 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 RPGRIP1Q96KN7 1286 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 PANX2Q96RD6 677 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 TSGA10Q9BZW7 698 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 PCDHB6Q9Y5E3 794 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 SERPINB2P05120 415 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 TECP42680 631 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 SPICE1Q8N0Z3 855 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 DBNDD1Q9H9R9 158 aa10.3□□□□□ -0.76
COL21A1-201ENST00000244728 A0A0G2JLW4 131 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 TEX33O43247 280 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 CASP1P29466 404 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 E2F4Q16254 413 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 ARFGAP2Q8N6H7 521 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 CAPS2Q9BXY5 557 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 KIDINS220Q9ULH0 1771 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 SH2B2O14492 632 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 MYCLP12524 364 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 KRT13P13646 458 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 GJC1P36383 396 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 TEKT1Q969V4 418 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 EFCC1Q9HA90 598 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 CAPN7Q9Y6W3 813 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 DLC1Q96QB1 1528 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 PXDNLA1KZ92 1463 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 TCP10L2B9ZVM9 353 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 POLD1P28340 1107 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 MAGEA1P43355 309 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 MAP3K9P80192 1104 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 MAP2K1Q02750 393 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 ARPP21Q9UBL0 812 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 FEZ2Q9UHY8 353 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 ADGRG1Q9Y653 693 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 PIK3C2BO00750 1634 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 TMEM110-MUSTN1A8MSY1 372 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 MFAP3LO75121 409 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 FDPSP14324 419 aaKnown RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 PRDX5P30044 214 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 GBP2P32456 591 aaPredicted RBP10.29□□□□□ -0.76
COL21A1-201ENST00000244728 ADCY7P51828 1080 aa10.29□□□□□ -0.76
COL21A1-201ENST00000244728 TYW1BQ6NUM6 668 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms