RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 TREML2Q5T2D2 321 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 RGMBQ6NW40 437 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 BTNL9Q6UXG8 535 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 PROCA1Q8NCQ7 364 aaPredicted RBP13.31□□□□□ -0.28
TREM1-201ENST00000244709 JMJD4Q9H9V9 463 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 FBXO28Q9NVF7 368 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 V9GY48 417 aaPredicted RBP13.31□□□□□ -0.28
TREM1-201ENST00000244709 COL11A1P12107 1806 aaPredicted RBP13.31□□□□□ -0.28
TREM1-201ENST00000244709 DEXIO95424 95 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 FOSBP53539 338 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 AKAP17AQ02040 695 aaKnown RBP13.31□□□□□ -0.28
TREM1-201ENST00000244709 MOGSQ13724 837 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 PKN1Q16512 942 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
TREM1-201ENST00000244709 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 AIFM3Q96NN9 605 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 PIGSQ96S52 555 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
TREM1-201ENST00000244709 PRR12Q9ULL5 1215 aa13.31□□□□□ -0.28
TREM1-201ENST00000244709 PLA2G6O60733 806 aa13.3□□□□□ -0.28
TREM1-201ENST00000244709 FLOT1O75955 427 aa13.3□□□□□ -0.28
TREM1-201ENST00000244709 FAM160B2Q86V87 743 aa13.3□□□□□ -0.28
TREM1-201ENST00000244709 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
TREM1-201ENST00000244709 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
TREM1-201ENST00000244709 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
TREM1-201ENST00000244709 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
TREM1-201ENST00000244709 USP17L15C9J2P7 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L13C9JLJ4 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L11C9JVI0 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L18D6R9N7 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L22D6RA61 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L17D6RBQ6 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L19D6RCP7 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L20D6RJB6 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 SLC10A3P09131 477 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 DDIT3P35638 169 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 APLP1P51693 650 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 GTF2A2P52657 109 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 SNAP25P60880 206 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 USP17L24Q0WX57 530 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 CDC37Q16543 378 aaPredicted RBP13.29□□□□□ -0.28
TREM1-201ENST00000244709 PFKFB3Q16875 520 aaPredicted RBP13.29□□□□□ -0.28
TREM1-201ENST00000244709 CATSPERGQ6ZRH7 1159 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 FASTKD5Q7L8L6 764 aaKnown RBP13.29□□□□□ -0.28
TREM1-201ENST00000244709 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 ALG1Q9BT22 464 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 SMCHD1A6NHR9 2005 aa13.29□□□□□ -0.28
TREM1-201ENST00000244709 A0A0G2JMZ2 1700 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 CCL15-CCL14A0A0B4J2E2 113 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 CETPP11597 493 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 SCG2P13521 617 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 CCL15Q16663 113 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 GPAT2Q6NUI2 795 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 WASF1Q92558 559 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
TREM1-201ENST00000244709 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
TREM1-201ENST00000244709 PPP1R9AQ9ULJ8 1098 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
TREM1-201ENST00000244709 ZBTB5O15062 677 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 HOXA7P31268 230 aaPredicted RBP13.28□□□□□ -0.28
TREM1-201ENST00000244709 QRICH1Q2TAL8 776 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 LARP1BQ659C4 914 aaKnown RBP13.28□□□□□ -0.28
TREM1-201ENST00000244709 WWC2Q6AWC2 1192 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 PRPF38AQ8NAV1 312 aaKnown RBP13.28□□□□□ -0.28
TREM1-201ENST00000244709 BRI3BPQ8WY22 251 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 GPKOWQ92917 476 aaPredicted RBP eCLIP13.28□□□□□ -0.28
TREM1-201ENST00000244709 SHISA4Q96DD7 197 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 HHIPL1Q96JK4 782 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 RANBP17Q9H2T7 1088 aaKnown RBP13.28□□□□□ -0.28
TREM1-201ENST00000244709 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 GJB4Q9NTQ9 266 aa13.28□□□□□ -0.28
TREM1-201ENST00000244709 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 PPP1R11O60927 126 aaPredicted RBP13.27□□□□□ -0.29
TREM1-201ENST00000244709 SYT1P21579 422 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 DSG3P32926 999 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 PKP1Q13835 747 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 COG2Q14746 738 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 OTUD7BQ6GQQ9 843 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.29
TREM1-201ENST00000244709 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 ATG4CQ96DT6 458 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 C8orf76Q96K31 380 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 VPS54Q9P1Q0 977 aa13.27□□□□□ -0.29
TREM1-201ENST00000244709 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
TREM1-201ENST00000244709 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
TREM1-201ENST00000244709 TAL1P17542 331 aaPredicted RBP13.26□□□□□ -0.29
TREM1-201ENST00000244709 PDCP20941 246 aa13.26□□□□□ -0.29
TREM1-201ENST00000244709 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
TREM1-201ENST00000244709 CYP4F22Q6NT55 531 aa13.26□□□□□ -0.29
TREM1-201ENST00000244709 CCDC174Q6PII3 467 aa13.26□□□□□ -0.29
TREM1-201ENST00000244709 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
TREM1-201ENST00000244709 STXBP3O00186 592 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 STX6O43752 255 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms