RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 SP8Q8IXZ3 490 aa24.84■■□□□ 1.57
RNF39-201ENST00000244360 SAMSN1Q9NSI8 373 aaKnown RBP24.84■■□□□ 1.57
RNF39-201ENST00000244360 CASP1P29466 404 aa24.83■■□□□ 1.57
RNF39-201ENST00000244360 HSPA1LP34931 641 aa24.83■■□□□ 1.57
RNF39-201ENST00000244360 ETF1P62495 437 aaKnown RBP24.83■■□□□ 1.57
RNF39-201ENST00000244360 ELF2Q15723 593 aa24.83■■□□□ 1.57
RNF39-201ENST00000244360 KMT5BQ4FZB7 885 aa24.83■■□□□ 1.57
RNF39-201ENST00000244360 CCDC194A0A1B0GVG4 234 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 PPP1R3GB7ZBB8 358 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 CDK11BP21127 795 aaKnown RBP24.82■■□□□ 1.56
RNF39-201ENST00000244360 RASGRP4Q8TDF6 673 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 MYH1P12882 1939 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 PLIN4Q96Q06 1357 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 SYNRGQ9UMZ2 1314 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 A0A1B0GTH6 734 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 KLRF2D3W0D1 207 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 ZSCAN12O43309 604 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 GTPBP6O43824 516 aaPredicted RBP24.82■■□□□ 1.56
RNF39-201ENST00000244360 KIF20AO95235 890 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 SMARCA1P28370 1054 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 APTXQ7Z2E3 356 aaKnown RBP24.82■■□□□ 1.56
RNF39-201ENST00000244360 HEATR3Q7Z4Q2 680 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 HOMER1Q86YM7 354 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 TMEM139Q8IV31 216 aa24.82■■□□□ 1.56
RNF39-201ENST00000244360 SRRTQ9BXP5 876 aaKnown RBP24.82■■□□□ 1.56
RNF39-201ENST00000244360 PPEF1O14829 653 aaPredicted RBP24.81■■□□□ 1.56
RNF39-201ENST00000244360 HSP90AA4PQ58FG1 418 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 CDKAL1Q5VV42 579 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 SPECC1LQ69YQ0 1117 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 MTRQ99707 1265 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 SUGT1Q9Y2Z0 365 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 DAGLAQ9Y4D2 1042 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 QSER1Q2KHR3 1735 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 C6orf229H3BNL8 230 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 NR1I3Q14994 352 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 KRT222Q8N1A0 295 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 QTRT2Q9H974 415 aaKnown RBP24.81■■□□□ 1.56
RNF39-201ENST00000244360 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.81■■□□□ 1.56
RNF39-201ENST00000244360 ANKRD31Q8N7Z5 1873 aa24.81■■□□□ 1.56
RNF39-201ENST00000244360 GOLGA6L9A6NEM1 432 aa24.8■■□□□ 1.56
RNF39-201ENST00000244360 ARHGAP6O43182 974 aa24.8■■□□□ 1.56
RNF39-201ENST00000244360 FBXO38Q6PIJ6 1188 aa24.8■■□□□ 1.56
RNF39-201ENST00000244360 COA1Q9GZY4 146 aa24.8■■□□□ 1.56
RNF39-201ENST00000244360 ZMYND12Q9H0C1 365 aa24.8■■□□□ 1.56
RNF39-201ENST00000244360 ATP6V0A2Q9Y487 856 aa24.8■■□□□ 1.56
RNF39-201ENST00000244360 PARP1P09874 1014 aaKnown RBP24.8■■□□□ 1.56
RNF39-201ENST00000244360 NRXN2Q9P2S2 1712 aa24.79■■□□□ 1.56
RNF39-201ENST00000244360 GOLGA8HP0CJ92 632 aa24.79■■□□□ 1.56
RNF39-201ENST00000244360 HMGB2P26583 209 aaKnown RBP24.79■■□□□ 1.56
RNF39-201ENST00000244360 KRT27Q7Z3Y8 459 aa24.79■■□□□ 1.56
RNF39-201ENST00000244360 CEP95Q96GE4 821 aa24.79■■□□□ 1.56
RNF39-201ENST00000244360 BRWD3Q6RI45 1802 aa24.79■■□□□ 1.56
RNF39-201ENST00000244360 LAD1O00515 517 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 TRIM37O94972 964 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 TXLNAP40222 546 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 PROM2Q8N271 834 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.78■■□□□ 1.56
RNF39-201ENST00000244360 V9GYY5 206 aaPredicted RBP24.78■■□□□ 1.56
RNF39-201ENST00000244360 PRPHP41219 470 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 PTPN21Q16825 1174 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 RASGRP2Q7LDG7 609 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 CCDC12Q8WUD4 166 aaPredicted RBP24.78■■□□□ 1.56
RNF39-201ENST00000244360 FAM53CQ9NYF3 392 aa24.78■■□□□ 1.56
RNF39-201ENST00000244360 GTF2IP78347 998 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 INF2Q27J81 1249 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 DTHD1Q6ZMT9 781 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 TC2NQ8N9U0 490 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 TMEM60Q9H2L4 133 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 GABPAQ06546 454 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 TXNRD1Q16881 649 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 KLHL10Q6JEL2 608 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 SMYD4Q8IYR2 804 aaPredicted RBP24.77■■□□□ 1.56
RNF39-201ENST00000244360 STAMQ92783 540 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 BLZF1Q9H2G9 400 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 DISC1Q9NRI5 854 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 MTMR7Q9Y216 660 aa24.77■■□□□ 1.56
RNF39-201ENST00000244360 H2AFXP16104 143 aaPredicted RBP24.76■■□□□ 1.55
RNF39-201ENST00000244360 GOLGA8FQ08AF8 430 aa24.76■■□□□ 1.55
RNF39-201ENST00000244360 GOLGA8DPQ0D2H9 430 aa24.76■■□□□ 1.55
RNF39-201ENST00000244360 KRT25Q7Z3Z0 450 aa24.76■■□□□ 1.55
RNF39-201ENST00000244360 DNAI1Q9UI46 699 aa24.76■■□□□ 1.55
RNF39-201ENST00000244360 REXO1L1PQ8IX06 675 aa24.76■■□□□ 1.55
RNF39-201ENST00000244360 RRP36Q96EU6 259 aaKnown RBP24.76■■□□□ 1.55
RNF39-201ENST00000244360 RMND1Q9NWS8 449 aa24.76■■□□□ 1.55
RNF39-201ENST00000244360 ADD3Q9UEY8 706 aaKnown RBP24.76■■□□□ 1.55
RNF39-201ENST00000244360 C10orf71Q711Q0 1435 aa24.75■■□□□ 1.55
RNF39-201ENST00000244360 PBX1P40424 430 aa24.75■■□□□ 1.55
RNF39-201ENST00000244360 STX17P56962 302 aa24.75■■□□□ 1.55
RNF39-201ENST00000244360 TRIM65Q6PJ69 517 aa24.75■■□□□ 1.55
RNF39-201ENST00000244360 USP17L2Q6R6M4 530 aa24.75■■□□□ 1.55
RNF39-201ENST00000244360 CTAGE1Q96RT6 745 aa24.75■■□□□ 1.55
RNF39-201ENST00000244360 CCSER1Q9C0I3 900 aa24.75■■□□□ 1.55
RNF39-201ENST00000244360 STX10O60499 249 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 STAT6P42226 847 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 NAPAP54920 295 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 NAALADL2Q58DX5 795 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 ZNF658Q5TYW1 1059 aaPredicted RBP24.74■■□□□ 1.55
RNF39-201ENST00000244360 CPVLQ9H3G5 476 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 RWDD2AQ9UIY3 292 aa24.74■■□□□ 1.55
RNF39-201ENST00000244360 EP400Q96L91 3159 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms