RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 WWC2Q6AWC2 1192 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 RCSD1Q6JBY9 416 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 PURBQ96QR8 312 aaKnown RBP13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 BLZF1Q9H2G9 400 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 VAT1LQ9HCJ6 419 aa13.5□□□□□ -0.25
SEC61A1-201ENST00000243253 SYF2O95926 243 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 AARSP49588 968 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 ZNF174Q15697 407 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 CPVLQ9H3G5 476 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 FAM205AQ6ZU69 1335 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 PRCPP42785 496 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 TUBB4BP68371 445 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 CHRNDQ07001 517 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 WHAMMP3Q1A5X7 153 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 TTC38Q5R3I4 469 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 PAPD7Q5XG87 772 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 NACAP1Q9BZK3 213 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 GTPBP6O43824 516 aaPredicted RBP13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 KIF5CO60282 957 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 CCT6AP40227 531 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 ADSSL1Q8N142 457 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 ESR2Q92731 530 aa13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 RBM28Q9NW13 759 aaKnown RBP13.49□□□□□ -0.25
SEC61A1-201ENST00000243253 NKRFO15226 690 aaKnown RBP eCLIP13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 DDAH1O94760 285 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 BMP15O95972 392 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 ZSCAN26Q16670 478 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 HDXQ7Z353 690 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 GOLGA5Q8TBA6 731 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 PDS5AQ29RF7 1337 aaKnown RBP13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 IRS2Q9Y4H2 1338 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 TRAPPC10P48553 1259 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 CASP8Q14790 479 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 CYP26C1Q6V0L0 522 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 NAPGQ99747 312 aaPredicted RBP13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 NAV1Q8NEY1 1877 aa13.48□□□□□ -0.25
SEC61A1-201ENST00000243253 TTC26A0AVF1 554 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 KCNJ12Q14500 433 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 PFKFB3Q16875 520 aaPredicted RBP13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 NCAPH2Q6IBW4 605 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 GDAQ9Y2T3 454 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 A0A1W2PQC6 194 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 ORC4O43929 436 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 NDUFA10O95299 355 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 TYW1BQ6NUM6 668 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 FOCADQ5VW36 1801 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 POTEB2H3BUK9 544 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 PCP11498 1178 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 ATP2B2Q01814 1243 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 FAM98CQ17RN3 349 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 ARL6IP4Q66PJ3 421 aaKnown RBP13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 CAPN11Q9UMQ6 739 aa13.47□□□□□ -0.25
SEC61A1-201ENST00000243253 ACTN2P35609 894 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 PAK1Q13153 545 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 TRIM14Q14142 442 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 FOXR1Q6PIV2 292 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 MYO6Q9UM54 1294 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 TFR2Q9UP52 801 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 FLT1P17948 1338 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 TRIM49BA6NDI0 452 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 RPN1P04843 607 aaKnown RBP13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 DDB1Q16531 1140 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 MB21D1Q8N884 522 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 NELFBQ8WX92 580 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 VPS16Q9H269 839 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 VIPAS39Q9H9C1 493 aa13.46□□□□□ -0.25
SEC61A1-201ENST00000243253 MAGEB6P1A0A0J9YX57 407 aa13.46□□□□□ -0.26
SEC61A1-201ENST00000243253 TTI2Q6NXR4 508 aa13.46□□□□□ -0.26
SEC61A1-201ENST00000243253 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.46□□□□□ -0.26
SEC61A1-201ENST00000243253 DUSP9Q99956 384 aaKnown RBP13.46□□□□□ -0.26
SEC61A1-201ENST00000243253 KBTBD4Q9NVX7 518 aa13.46□□□□□ -0.26
SEC61A1-201ENST00000243253 TAB2Q9NYJ8 693 aa13.46□□□□□ -0.26
SEC61A1-201ENST00000243253 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.26
SEC61A1-201ENST00000243253 AGPSO00116 658 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 KLRK1P26718 216 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 PPARDQ03181 441 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 KCNB1Q14721 858 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 PTF1AQ7RTS3 328 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 ZNF572Q7Z3I7 529 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 MMS19Q96T76 1030 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 STX8Q9UNK0 236 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 LGALS16A8MUM7 142 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 ATP1A1P05023 1023 aaKnown RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 USP14P54578 494 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 IFIT1BQ5T764 474 aaKnown RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 SRLQ86TD4 932 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 SLF1Q9BQI6 1058 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 SRP68Q9UHB9 627 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms