RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 POMGNT1Q8WZA1 660 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 CEP19Q96LK0 163 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 HAUS2Q9NVX0 235 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
TARDBP-201ENST00000240185 BFSP1Q12934 665 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 TTC6Q86TZ1 520 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 PSPC1Q8WXF1 523 aaKnown RBP15.15■□□□□ 0.02
TARDBP-201ENST00000240185 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 PDE1BQ01064 536 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 HADHQ16836 314 aaKnown RBP15.15■□□□□ 0.02
TARDBP-201ENST00000240185 TADA2BQ86TJ2 420 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 CDKL2Q92772 493 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 TUBB6Q9BUF5 446 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 INTUQ9ULD6 942 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
TARDBP-201ENST00000240185 ATP8A1Q9Y2Q0 1164 aa15.15■□□□□ 0.02
TARDBP-201ENST00000240185 ADGRF5Q8IZF2 1346 aa15.14■□□□□ 0.02
TARDBP-201ENST00000240185 ANKRD65E5RJM6 399 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 GARSP41250 739 aaKnown RBP15.14■□□□□ 0.01
TARDBP-201ENST00000240185 RANBP1P43487 201 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 STX1BP61266 288 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 ZNF827Q17R98 1081 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 GRAMD1BQ3KR37 738 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 CCHCR1Q8TD31 782 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 SPZ1Q9BXG8 430 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 GLT8D2Q9H1C3 349 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 NRBP1Q9UHY1 535 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
TARDBP-201ENST00000240185 CLCN6P51797 869 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 LMNB2Q03252 620 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 TRIM42Q8IWZ5 723 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 IWS1Q96ST2 819 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 CNOT10Q9H9A5 744 aaKnown RBP15.14■□□□□ 0.01
TARDBP-201ENST00000240185 PTPN22Q9Y2R2 807 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 SLC4A7Q9Y6M7 1214 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 TNNI1P19237 187 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 POLR2FP61218 127 aaKnown RBP15.14■□□□□ 0.01
TARDBP-201ENST00000240185 PARD6BQ9BYG5 372 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 CCDC68Q9H2F9 335 aa15.14■□□□□ 0.01
TARDBP-201ENST00000240185 H7C1D1 291 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 PRDM1O75626 825 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 BIRC2Q13490 618 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 SLMAPQ14BN4 828 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 SCYL2Q6P3W7 929 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 MAGOHBQ96A72 148 aaKnown RBP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 DKC1O60832 514 aaKnown RBP eCLIP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 LONP1P36776 959 aaKnown RBP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 TERF2Q15554 542 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 ZNF449Q6P9G9 518 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 ZC3H18Q86VM9 953 aaKnown RBP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 MCUQ8NE86 351 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 TIMM10P62072 90 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 MYOCDQ8IZQ8 938 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 SMYD2Q9NRG4 433 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 NIP7Q9Y221 180 aaKnown RBP eCLIP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 NR1D1P20393 614 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 CDR2Q01850 454 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 GPT2Q8TD30 523 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 RIOK1Q9BRS2 568 aaKnown RBP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 DAAM1Q9Y4D1 1078 aa15.13■□□□□ 0.01
TARDBP-201ENST00000240185 SCAF11Q99590 1463 aaKnown RBP15.13■□□□□ 0.01
TARDBP-201ENST00000240185 ADCY7P51828 1080 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 PLCB4Q15147 1175 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 C16orf87Q6PH81 154 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 TRMT10CQ7L0Y3 403 aaKnown RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 TRIML1Q8N9V2 468 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 UIMC1Q96RL1 719 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 USP28Q96RU2 1077 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 CYTH2Q99418 400 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 ARMT1Q9H993 441 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 ARMCX3Q9UH62 379 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 TADA3O75528 432 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 ECE1P42892 770 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 RBM6P78332 1123 aaKnown RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 RASSF7Q02833 373 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 SPATA1Q5VX52 437 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 TRIM50Q86XT4 487 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 APPBP2Q92624 585 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 PHLPP2Q6ZVD8 1323 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 GPAA1O43292 621 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 ESRRAP11474 423 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 PLTPP55058 493 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 TRIM56Q9BRZ2 755 aaKnown RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 GINS2Q9Y248 185 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 TROQ12816 1431 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■■□□ 15.4
TARDBP-201ENST00000240185 DDX39AO00148 427 aaKnown RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 KRT10P13645 584 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 CASP14P31944 242 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 DYNC1I2Q13409 638 aaKnown RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 TMEM259Q4ZIN3 620 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 DYDC2Q96IM9 177 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 POLR3CQ9BUI4 534 aaPredicted RBP15.12■□□□□ 0.01
TARDBP-201ENST00000240185 NACA2Q9H009 215 aa15.12■□□□□ 0.01
TARDBP-201ENST00000240185 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms