RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 SUPT20HL1Q3ZLR7 823 aa21.4■■□□□ 1.02
SNX17-201ENST00000233575 SCAND2PQ9GZW5 306 aaPredicted RBP21.4■■□□□ 1.02
SNX17-201ENST00000233575 VCPKMTQ9H867 229 aa21.4■■□□□ 1.02
SNX17-201ENST00000233575 CLIC4Q9Y696 253 aa21.4■■□□□ 1.02
SNX17-201ENST00000233575 TMEM232C9JQI7 657 aa21.39■■□□□ 1.02
SNX17-201ENST00000233575 PTMSP20962 102 aa21.39■■□□□ 1.02
SNX17-201ENST00000233575 FAM83BQ5T0W9 1011 aa21.39■■□□□ 1.02
SNX17-201ENST00000233575 SCYL3Q8IZE3 742 aa21.39■■□□□ 1.02
SNX17-201ENST00000233575 ZNF396Q96N95 335 aaPredicted RBP21.39■■□□□ 1.02
SNX17-201ENST00000233575 GOPCQ9HD26 462 aa21.39■■□□□ 1.02
SNX17-201ENST00000233575 SH3GLB2Q9NR46 395 aa21.39■■□□□ 1.02
SNX17-201ENST00000233575 CFAP45Q9UL16 551 aa21.39■■□□□ 1.02
SNX17-201ENST00000233575 USP2O75604 605 aaPredicted RBP21.39■■□□□ 1.01
SNX17-201ENST00000233575 POTEIP0CG38 1075 aa21.39■■□□□ 1.01
SNX17-201ENST00000233575 POTEJP0CG39 1038 aa21.39■■□□□ 1.01
SNX17-201ENST00000233575 SNAP25P60880 206 aa21.39■■□□□ 1.01
SNX17-201ENST00000233575 TNFRSF25Q93038 417 aa21.39■■□□□ 1.01
SNX17-201ENST00000233575 COA7Q96BR5 231 aa21.39■■□□□ 1.01
SNX17-201ENST00000233575 MTMR8Q96EF0 704 aa21.39■■□□□ 1.01
SNX17-201ENST00000233575 IQCA1LA6NCM1 817 aa21.38■■□□□ 1.01
SNX17-201ENST00000233575 ZC3H15Q8WU90 426 aaKnown RBP21.38■■□□□ 1.01
SNX17-201ENST00000233575 FEZ1Q99689 392 aa21.38■■□□□ 1.01
SNX17-201ENST00000233575 TOB1P50616 345 aaPredicted RBP21.38■■□□□ 1.01
SNX17-201ENST00000233575 NAPAP54920 295 aa21.38■■□□□ 1.01
SNX17-201ENST00000233575 PNMA6FA0A0J9YX94 578 aa21.37■■□□□ 1.01
SNX17-201ENST00000233575 IKQ13123 557 aaPredicted RBP21.37■■□□□ 1.01
SNX17-201ENST00000233575 KLHL40Q2TBA0 621 aa21.37■■□□□ 1.01
SNX17-201ENST00000233575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.37■■□□□ 1.019e-8■■□□□ 11.5
SNX17-201ENST00000233575 RASGRP4Q8TDF6 673 aa21.37■■□□□ 1.01
SNX17-201ENST00000233575 SH2D4AQ9H788 454 aa21.37■■□□□ 1.01
SNX17-201ENST00000233575 GINM1Q9NU53 330 aa21.37■■□□□ 1.01
SNX17-201ENST00000233575 RTEL1Q9NZ71 1219 aa21.37■■□□□ 1.01
SNX17-201ENST00000233575 ELP1O95163 1332 aa21.37■■□□□ 1.01
SNX17-201ENST00000233575 ZBTB5O15062 677 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 PTPRAP18433 802 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 CSPP1Q1MSJ5 1256 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 ATL3Q6DD88 541 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 CDCA5Q96FF9 252 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 PGBD1Q96JS3 809 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 GZF1Q9H116 711 aaPredicted RBP21.36■■□□□ 1.01
SNX17-201ENST00000233575 RCOR1Q9UKL0 485 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 PCDHA4Q9UN74 947 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 PHIPQ8WWQ0 1821 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 MTMR2Q13614 643 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 CDC37Q16543 378 aaPredicted RBP21.36■■□□□ 1.01
SNX17-201ENST00000233575 QRICH1Q2TAL8 776 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 SKOR2Q2VWA4 1001 aaPredicted RBP21.36■■□□□ 1.01
SNX17-201ENST00000233575 SYDE2Q5VT97 1194 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 ANO1Q5XXA6 986 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 BLIDQ8IZY5 108 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 CCDC148Q8NFR7 591 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 BRMS1Q9HCU9 246 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 POLR3EQ9NVU0 708 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.36■■□□□ 1.01
SNX17-201ENST00000233575 OTOFQ9HC10 1997 aa21.36■■□□□ 1.01
SNX17-201ENST00000233575 PAPPA2Q9BXP8 1791 aa21.35■■□□□ 1.01
SNX17-201ENST00000233575 UBE2HP62256 183 aa21.35■■□□□ 1.01
SNX17-201ENST00000233575 SPP2Q13103 211 aa21.35■■□□□ 1.01
SNX17-201ENST00000233575 BTNL9Q6UXG8 535 aa21.35■■□□□ 1.01
SNX17-201ENST00000233575 LINC00301Q8NCQ3 95 aa21.35■■□□□ 1.01
SNX17-201ENST00000233575 ZMYND12Q9H0C1 365 aa21.35■■□□□ 1.01
SNX17-201ENST00000233575 PICK1Q9NRD5 415 aa21.35■■□□□ 1.01
SNX17-201ENST00000233575 M0R2N6 131 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 WNT7AO00755 349 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 TAL1P17542 331 aaPredicted RBP21.34■■□□□ 1.01
SNX17-201ENST00000233575 CALML3P27482 149 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 NASPP49321 788 aaPredicted RBP21.34■■□□□ 1.01
SNX17-201ENST00000233575 STAT2P52630 851 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 SF3A1Q15459 793 aaKnown RBP21.34■■□□□ 1.01
SNX17-201ENST00000233575 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.34■■□□□ 1.01
SNX17-201ENST00000233575 KIAA1683Q9H0B3 1180 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 FBXO28Q9NVF7 368 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 PRR12Q9ULL5 1215 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 SMCO2A6NFE2 343 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 ATP2B1P20020 1258 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 MOB2Q70IA6 237 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 PNMA8AQ86V59 439 aaPredicted RBP21.34■■□□□ 1.01
SNX17-201ENST00000233575 ZHX2Q9Y6X8 837 aa21.34■■□□□ 1.01
SNX17-201ENST00000233575 TRIM75PA6NK02 468 aa21.33■■□□□ 1.01
SNX17-201ENST00000233575 VGLL4Q14135 290 aa21.33■■□□□ 1.01
SNX17-201ENST00000233575 PIK3AP1Q6ZUJ8 805 aa21.33■■□□□ 1.01
SNX17-201ENST00000233575 EMILIN3Q9NT22 766 aa21.33■■□□□ 1.01
SNX17-201ENST00000233575 PCDHA6Q9UN73 950 aa21.33■■□□□ 1.01
SNX17-201ENST00000233575 PCDHB6Q9Y5E3 794 aa21.33■■□□□ 1.01
SNX17-201ENST00000233575 PCDHA8Q9Y5H6 950 aa21.33■■□□□ 1.01
SNX17-201ENST00000233575 STK38Q15208 465 aa21.33■■□□□ 1
SNX17-201ENST00000233575 NOL9Q5SY16 702 aaKnown RBP21.33■■□□□ 1
SNX17-201ENST00000233575 DAGLBQ8NCG7 672 aa21.33■■□□□ 1
SNX17-201ENST00000233575 WDR18Q9BV38 432 aa21.33■■□□□ 1
SNX17-201ENST00000233575 RRAGCQ9HB90 399 aa21.33■■□□□ 1
SNX17-201ENST00000233575 CLEC11AQ9Y240 323 aa21.33■■□□□ 1
SNX17-201ENST00000233575 SNCAIPQ9Y6H5 919 aa21.33■■□□□ 1
SNX17-201ENST00000233575 PTPAQ15257 358 aa21.32■■□□□ 1
SNX17-201ENST00000233575 RILPL1Q5EBL4 403 aa21.32■■□□□ 1
SNX17-201ENST00000233575 MAP1SQ66K74 1059 aaPredicted RBP21.32■■□□□ 1
SNX17-201ENST00000233575 CAVIN1Q6NZI2 390 aaKnown RBP21.32■■□□□ 1
SNX17-201ENST00000233575 SAMD1Q6SPF0 538 aaPredicted RBP21.32■■□□□ 1
SNX17-201ENST00000233575 ZNF280CQ8ND82 737 aa21.32■■□□□ 1
SNX17-201ENST00000233575 CCDC12Q8WUD4 166 aaPredicted RBP21.32■■□□□ 1
SNX17-201ENST00000233575 hCG_1984214I3L0E3 225 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms