RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 UBE2Q1Q7Z7E8 422 aa13.26□□□□□ -0.29
SF3B6-201ENST00000233468 DGKHQ86XP1 1220 aa13.26□□□□□ -0.29
SF3B6-201ENST00000233468 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
SF3B6-201ENST00000233468 CCAR1Q8IX12 1150 aaKnown RBP13.26□□□□□ -0.29
SF3B6-201ENST00000233468 MB21D1Q8N884 522 aa13.26□□□□□ -0.29
SF3B6-201ENST00000233468 P2RX7Q99572 595 aaKnown RBP13.26□□□□□ -0.29
SF3B6-201ENST00000233468 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
SF3B6-201ENST00000233468 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
SF3B6-201ENST00000233468 NEDD4P46934 1319 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 B4E1Z4 1266 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 FLOT1O75955 427 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 GJB1P08034 283 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 NOVP48745 357 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 KRT32Q14532 448 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 LBX2Q6XYB7 198 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 SPICE1Q8N0Z3 855 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
SF3B6-201ENST00000233468 RABGAP1Q9Y3P9 1069 aa13.25□□□□□ -0.29
SF3B6-201ENST00000233468 E7EWF7 191 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 ADCY3O60266 1144 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 NDUFB10O96000 172 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 SLC1A4P43007 532 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 FLT3LGP49771 235 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 LRRC47Q8N1G4 583 aaKnown RBP13.24□□□□□ -0.29
SF3B6-201ENST00000233468 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 U2AF1L4Q8WU68 220 aaKnown RBP13.24□□□□□ -0.29
SF3B6-201ENST00000233468 GMCL1Q96IK5 515 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 ZSCAN10Q96SZ4 725 aaPredicted RBP13.24□□□□□ -0.29
SF3B6-201ENST00000233468 OCEL1Q9H607 264 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 KAT14Q9H8E8 782 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 ZSWIM5Q9P217 1185 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 MORF4L1Q9UBU8 362 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 ISY1Q9ULR0 285 aaKnown RBP13.24□□□□□ -0.29
SF3B6-201ENST00000233468 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
SF3B6-201ENST00000233468 LOC285556D6RIA3 1793 aa13.24□□□□□ -0.29
SF3B6-201ENST00000233468 PLXNB2O15031 1838 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 SLC27A2O14975 620 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 NMT2O60551 498 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 FDX1P10109 184 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 BMP3P12645 472 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 MCCP23508 829 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 FAM83BQ5T0W9 1011 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 COA7Q96BR5 231 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
SF3B6-201ENST00000233468 TACC3Q9Y6A5 838 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 COL6A3P12111 3177 aa13.23□□□□□ -0.29
SF3B6-201ENST00000233468 BAZ2AQ9UIF9 1905 aaKnown RBP13.23□□□□□ -0.29
SF3B6-201ENST00000233468 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 SPDYE16A6NNV3 312 aaPredicted RBP13.22□□□□□ -0.29
SF3B6-201ENST00000233468 INHAP05111 366 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 HMGB1P09429 215 aaKnown RBP13.22□□□□□ -0.29
SF3B6-201ENST00000233468 MAPK4P31152 587 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 UBXN2AP68543 259 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 IKQ13123 557 aaPredicted RBP13.22□□□□□ -0.29
SF3B6-201ENST00000233468 IFIT1BQ5T764 474 aaKnown RBP13.22□□□□□ -0.29
SF3B6-201ENST00000233468 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 PRPF38AQ8NAV1 312 aaKnown RBP13.22□□□□□ -0.29
SF3B6-201ENST00000233468 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 ANKS1AQ92625 1134 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 SLF1Q9BQI6 1058 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 TMEM47Q9BQJ4 181 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 PAGR1Q9BTK6 254 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 PPP1R9AQ9ULJ8 1098 aa13.22□□□□□ -0.29
SF3B6-201ENST00000233468 LAMA3Q16787 3333 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 TNKSO95271 1327 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 STK25O00506 426 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
SF3B6-201ENST00000233468 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.29
SF3B6-201ENST00000233468 PEX10O60683 326 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 PLA2G6O60733 806 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 ZBED4O75132 1171 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 FARP2O94887 1054 aaPredicted RBP13.21□□□□□ -0.29
SF3B6-201ENST00000233468 SGPL1O95470 568 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 MCM5P33992 734 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 COPB2P35606 906 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 STAT2P52630 851 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 ERVK-9P63128 1117 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 ERVK-24P63145 666 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 KIAA1755Q5JYT7 1200 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 TMTC2Q8N394 836 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 DEFB118Q96PH6 123 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 RBPJLQ9UBG7 517 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
SF3B6-201ENST00000233468 TMEM232C9JQI7 657 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 TFRCP02786 760 aaKnown RBP13.2□□□□□ -0.3
SF3B6-201ENST00000233468 CCDC96Q2M329 555 aa13.2□□□□□ -0.3
SF3B6-201ENST00000233468 GPATCH4Q5T3I0 446 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms