RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PNMA1Q8ND90 353 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 RASGRP4Q8TDF6 673 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 NYXQ9GZU5 481 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 ARFGAP3Q9NP61 516 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 NT5C2P49902 561 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 TFAP4Q01664 338 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 GRM4Q14833 912 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 TYW1BQ6NUM6 668 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 CYP26C1Q6V0L0 522 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 BARGINQ6ZT62 677 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 STAG2Q8N3U4 1231 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 CEP112Q8N8E3 955 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 ANKS1AQ92625 1134 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 NLRP3Q96P20 1036 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
LTBR-201ENST00000228918 MKRN1Q9UHC7 482 aaKnown RBP18.35■□□□□ 0.53
LTBR-201ENST00000228918 MYH1P12882 1939 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 IRS2Q9Y4H2 1338 aa18.35■□□□□ 0.53
LTBR-201ENST00000228918 ROBO3Q96MS0 1386 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 ZBTB22O15209 634 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 TUBB2AQ13885 445 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 SLC4A8Q2Y0W8 1093 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 NAALADL2Q58DX5 795 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 C12orf60Q5U649 245 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 DZIP1Q86YF9 867 aaKnown RBP18.34■□□□□ 0.53
LTBR-201ENST00000228918 SLC35F6Q8N357 371 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 TUBB2BQ9BVA1 445 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 JAG2Q9Y219 1238 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 NAV1Q8NEY1 1877 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 CCDC151A5D8V7 595 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 WWC2Q6AWC2 1192 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 TXNRD3Q86VQ6 643 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 MAPK8IP1Q9UQF2 711 aa18.34■□□□□ 0.53
LTBR-201ENST00000228918 CTAGE9A4FU28 777 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 H7C1D1 291 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 ARHGAP25P42331 645 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 KCNQ4P56696 695 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 SMIM5Q71RC9 77 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 IRF2BP1Q8IU81 584 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 DAGLBQ8NCG7 672 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 ZSWIM4Q9H7M6 989 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 MAD2L2Q9UI95 211 aa18.33■□□□□ 0.53
LTBR-201ENST00000228918 CCDC194A0A1B0GVG4 234 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 KRT9P35527 623 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 KCNB1Q14721 858 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 BRD3Q15059 726 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 SLC35G1Q2M3R5 365 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 KIF4BQ2VIQ3 1234 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 SPTY2D1Q68D10 685 aaPredicted RBP18.33■□□□□ 0.52
LTBR-201ENST00000228918 DTHD1Q6ZMT9 781 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 FUT8Q9BYC5 575 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 TMEM60Q9H2L4 133 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 PUF60Q9UHX1 559 aaKnown RBP18.33■□□□□ 0.52
LTBR-201ENST00000228918 PCDHA6Q9UN73 950 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 PCDHA8Q9Y5H6 950 aa18.33■□□□□ 0.52
LTBR-201ENST00000228918 TRIM49BA6NDI0 452 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 ABL1P00519 1130 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 PARP1P09874 1014 aaKnown RBP18.32■□□□□ 0.52
LTBR-201ENST00000228918 GNAQP50148 359 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 UBXN1Q04323 297 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
LTBR-201ENST00000228918 CCDC148Q8NFR7 591 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 DYNLL2Q96FJ2 89 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 ANKZF1Q9H8Y5 726 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 MYO1AQ9UBC5 1043 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 NARFQ9UHQ1 456 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 PP2D1A8MPX8 630 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 CYP2C19P33261 490 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
LTBR-201ENST00000228918 SETDB2Q96T68 719 aa18.32■□□□□ 0.52
LTBR-201ENST00000228918 NAPGQ99747 312 aaPredicted RBP18.32■□□□□ 0.52
LTBR-201ENST00000228918 KLRC4O43908 158 aa18.31■□□□□ 0.52
LTBR-201ENST00000228918 MYL1P05976 194 aa18.31■□□□□ 0.52
LTBR-201ENST00000228918 USP5P45974 858 aa18.31■□□□□ 0.52
LTBR-201ENST00000228918 LONRF2Q1L5Z9 754 aa18.31■□□□□ 0.52
LTBR-201ENST00000228918 GALNT17Q6IS24 598 aa18.31■□□□□ 0.52
LTBR-201ENST00000228918 MSANTD4Q8NCY6 345 aa18.31■□□□□ 0.52
LTBR-201ENST00000228918 CCSER1Q9C0I3 900 aa18.31■□□□□ 0.52
LTBR-201ENST00000228918 SRP68Q9UHB9 627 aaKnown RBP18.31■□□□□ 0.52
LTBR-201ENST00000228918 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
LTBR-201ENST00000228918 LGALS16A8MUM7 142 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 CYTH3O43739 400 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 EEF1GP26641 437 aaKnown RBP18.3■□□□□ 0.52
LTBR-201ENST00000228918 OAS2P29728 719 aaKnown RBP18.3■□□□□ 0.52
LTBR-201ENST00000228918 PMS1P54277 932 aaKnown RBP18.3■□□□□ 0.52
LTBR-201ENST00000228918 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
LTBR-201ENST00000228918 INF2Q27J81 1249 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 CCDC178Q5BJE1 867 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 SLF1Q9BQI6 1058 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 USP17L3A6NCW0 530 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 USP17L4A6NCW7 530 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 POTEB2H3BUK9 544 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 STXBP3O00186 592 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 PDE4CQ08493 712 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 USP17L1Q7RTZ2 530 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 MB21D1Q8N884 522 aa18.3■□□□□ 0.52
LTBR-201ENST00000228918 RASSF8Q8NHQ8 419 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms