RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 ANKZF1Q9H8Y5 726 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 TAB2Q9NYJ8 693 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 ATP1A2P50993 1020 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 RTN1Q16799 776 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 BRIP1Q9BX63 1249 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 PIM2Q9P1W9 311 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
CCND1-201ENST00000227507 TMEM132AQ24JP5 1023 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 SND1Q7KZF4 910 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCND1-201ENST00000227507 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 L1RE1Q9UN81 338 aa12.89□□□□□ -0.35
CCND1-201ENST00000227507 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
CCND1-201ENST00000227507 CDR1P51861 262 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 GNGT1P63211 74 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 RRAGBQ5VZM2 374 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 EFCAB13Q8IY85 973 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 ZNF609O15014 1411 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 CCDC194A0A1B0GVG4 234 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 GOLGA6BA6NDN3 693 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 TRAF1Q13077 416 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 MMS22LQ6ZRQ5 1243 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 ZNF34Q8IZ26 560 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 JPH2Q9BR39 696 aaPredicted RBP12.88□□□□□ -0.35
CCND1-201ENST00000227507 KCND1Q9NSA2 647 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 PSD3Q9NYI0 1048 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 CAMTA1Q9Y6Y1 1673 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 A0A087WUV0 522 aaPredicted RBP12.88□□□□□ -0.35
CCND1-201ENST00000227507 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 DEFB132Q7Z7B7 95 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 FOXP4Q8IVH2 680 aaPredicted RBP12.88□□□□□ -0.35
CCND1-201ENST00000227507 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
CCND1-201ENST00000227507 CALM1P0DP23 149 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 CALM2P0DP24 149 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 CALM3P0DP25 149 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 SF3A3Q12874 501 aaKnown RBP eCLIP12.87□□□□□ -0.358e-7■■■□□ 14.9
CCND1-201ENST00000227507 GBP6Q6ZN66 633 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 OSBP2Q969R2 916 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 HOOK2Q96ED9 719 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 PRDM16Q9HAZ2 1276 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 TFR2Q9UP52 801 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 CEP131Q9UPN4 1083 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 PLEKHG2Q9H7P9 1386 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 hCG_1642624A0A1W2PR95 340 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 M0R2C6 588 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
CCND1-201ENST00000227507 UBXN1Q04323 297 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 EZH2Q15910 746 aaKnown RBP12.87□□□□□ -0.35
CCND1-201ENST00000227507 MAPKAPK5Q8IW41 473 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
CCND1-201ENST00000227507 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCND1-201ENST00000227507 CTNND2Q9UQB3 1225 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 UBE2Q2LH0YL09 131 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 GGCXP38435 758 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 CORO7P57737 925 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
CCND1-201ENST00000227507 MCTP2Q6DN12 878 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
CCND1-201ENST00000227507 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 ZNHIT6Q9NWK9 470 aaKnown RBP12.87□□□□□ -0.35
CCND1-201ENST00000227507 TRIM10Q9UDY6 481 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 TNIP1Q15025 636 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 PDIA6Q15084 440 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 SLC15A2Q16348 729 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 KIFC2Q96AC6 838 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 BLZF1Q9H2G9 400 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 DBNDD1Q9H9R9 158 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 FAM169AQ9Y6X4 670 aa12.87□□□□□ -0.35
CCND1-201ENST00000227507 KRT18P05783 430 aaKnown RBP12.86□□□□□ -0.35
CCND1-201ENST00000227507 LRCH2Q5VUJ6 765 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 C21orf2O43822 256 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 TNFAIP1Q13829 316 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 PI16Q6UXB8 463 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 TGFBRAP1Q8WUH2 860 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 EHD4Q9H223 541 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 SYNRGQ9UMZ2 1314 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 ABL1P00519 1130 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 SATB1Q01826 763 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 TCP10Q12799 353 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 CCDC125Q86Z20 511 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 RNF217Q8TC41 542 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 SLC16A10Q8TF71 515 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 BCL9O00512 1426 aa12.86□□□□□ -0.35
CCND1-201ENST00000227507 MED1Q15648 1581 aaPredicted RBP12.85□□□□□ -0.35
CCND1-201ENST00000227507 MAP2K7O14733 419 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 SCNN1DP51172 638 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 GRIN1Q05586 938 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 MINPP1Q9UNW1 487 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 MCM3P25205 808 aa12.85□□□□□ -0.35
CCND1-201ENST00000227507 CAPS2Q9BXY5 557 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms