RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SLC16A2P36021 539 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 SLC4A3P48751 1232 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 STAT2P52630 851 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 SNAP25P60880 206 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 IRF5Q13568 498 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 NECTIN1Q15223 517 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 CCDC178Q5BJE1 867 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 MORN1Q5T089 497 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 NBPF11Q86T75 865 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 NCAPG2Q86XI2 1143 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 CPXCR1Q8N123 301 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 NCOA7Q8NI08 942 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 UBAC1Q9BSL1 405 aa14.9□□□□□ -0.02
LSM5-201ENST00000223084 RAVER2Q9HCJ3 691 aaKnown RBP14.9□□□□□ -0.02
LSM5-201ENST00000223084 BIN2Q9UBW5 565 aaPredicted RBP14.9□□□□□ -0.02
LSM5-201ENST00000223084 ZNF214Q9UL59 606 aaPredicted RBP14.9□□□□□ -0.02
LSM5-201ENST00000223084 CENPFP49454 3210 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 ZBED4O75132 1171 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 PDHBP11177 359 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 PTPREP23469 700 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 STAT3P40763 770 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 NT5C2P49902 561 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 COL9A3Q14050 684 aaPredicted RBP14.89□□□□□ -0.03
LSM5-201ENST00000223084 MTFR1Q15390 333 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 SEC23AQ15436 765 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 RALYLQ86SE5 291 aaKnown RBP14.89□□□□□ -0.03
LSM5-201ENST00000223084 FAM160B2Q86V87 743 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 SLAIN1Q8ND83 568 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 PNMA1Q8ND90 353 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 SHCBP1Q8NEM2 672 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 CHURC1Q8WUH1 139 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 SOCS4Q8WXH5 440 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 ANKS1AQ92625 1134 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 USP6NLQ92738 828 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 KAT14Q9H8E8 782 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 SLC38A10Q9HBR0 1119 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 SENP2Q9HC62 589 aa14.89□□□□□ -0.03
LSM5-201ENST00000223084 CTDP1Q9Y5B0 961 aaPredicted RBP14.89□□□□□ -0.03
LSM5-201ENST00000223084 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
LSM5-201ENST00000223084 SLC15A5A6NIM6 579 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 GOLGA8HP0CJ92 632 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 ANTXR2P58335 489 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 TRIM32Q13049 653 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 MAP2K5Q13163 448 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 IFIT1BQ5T764 474 aaKnown RBP14.88□□□□□ -0.03
LSM5-201ENST00000223084 SNRNP48Q6IEG0 339 aaKnown RBP14.88□□□□□ -0.03
LSM5-201ENST00000223084 RIOX2Q8IUF8 465 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 MB21D2Q8IYB1 491 aaPredicted RBP14.88□□□□□ -0.03
LSM5-201ENST00000223084 PXYLP1Q8TE99 480 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 PRR12Q9ULL5 1215 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 RIPK3Q9Y572 518 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 IVNS1ABPQ9Y6Y0 642 aa14.88□□□□□ -0.03
LSM5-201ENST00000223084 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 POTEFA5A3E0 1075 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 IFIT3O14879 490 aaKnown RBP14.87□□□□□ -0.03
LSM5-201ENST00000223084 PLA2G6O60733 806 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 SLC25A27O95847 323 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 INHAP05111 366 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 ADORA2AP29274 412 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 RGS2P41220 211 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 ZNF543Q08ER8 600 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 GRB14Q14449 540 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 CCL14Q16627 93 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 CCDC174Q6PII3 467 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 TRIB2Q92519 343 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 TEX13BQ9BXU2 312 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 CPVLQ9H3G5 476 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 MROH8Q9H579 483 aa14.87□□□□□ -0.03
LSM5-201ENST00000223084 GPHNQ9NQX3 736 aaPredicted RBP14.87□□□□□ -0.03
LSM5-201ENST00000223084 SNHG28P0DPA3 235 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 TAL1P17542 331 aaPredicted RBP14.86□□□□□ -0.03
LSM5-201ENST00000223084 SYDE2Q5VT97 1194 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 BTNL9Q6UXG8 535 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 AGBL1Q96MI9 1066 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 APBA2Q99767 749 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 UBA5Q9GZZ9 404 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 FLRT1Q9NZU1 646 aa14.86□□□□□ -0.03
LSM5-201ENST00000223084 ATP2A1O14983 1001 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 PRC1O43663 620 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 STRNO43815 780 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 COBLO75128 1261 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 FCER1AP12319 257 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 XRCC5P13010 732 aaKnown RBP14.85□□□□□ -0.03
LSM5-201ENST00000223084 CCL5P13501 91 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 UBXN2AP68543 259 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 WTAPQ15007 396 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 TMEM67Q5HYA8 995 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 RNF20Q5VTR2 975 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 DPP9Q86TI2 863 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 IGDCC4Q8TDY8 1250 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 MMP19Q99542 508 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 TMEM106CQ9BVX2 250 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 HOMER2Q9NSB8 354 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 ZNF536O15090 1300 aa14.85□□□□□ -0.03
LSM5-201ENST00000223084 ERICH2A1L162 156 aa14.84□□□□□ -0.03
LSM5-201ENST00000223084 HMGCRP04035 888 aa14.84□□□□□ -0.03
LSM5-201ENST00000223084 PGK2P07205 417 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms