RNA–Protein interactions for RNA: ENST00000222747.7

TSPAN12-201, Transcript of tetraspanin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN12, Length 2,798 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN12-201ENST00000222747 MSL3Q8N5Y2 521 aaKnown RBP16.51■□□□□ 0.23
TSPAN12-201ENST00000222747 SLF1Q9BQI6 1058 aa16.51■□□□□ 0.23
TSPAN12-201ENST00000222747 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
TSPAN12-201ENST00000222747 TTF2Q9UNY4 1162 aaKnown RBP16.51■□□□□ 0.23
TSPAN12-201ENST00000222747 XBP1P17861 261 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 DPYDQ12882 1025 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 TNFRSF25Q93038 417 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 MECOMQ03112 1051 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 CNGA4Q8IV77 575 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 SYMPKQ92797 1274 aaKnown RBP16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 CTNND2Q9UQB3 1225 aa16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.5■□□□□ 0.23
TSPAN12-201ENST00000222747 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 AMPD2Q01433 879 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 TUBB2AQ13885 445 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 KANK3Q6NY19 840 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 TMTC3Q6ZXV5 915 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 GDAP1L1Q96MZ0 367 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 TUBB2BQ9BVA1 445 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 MYO6Q9UM54 1294 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 LAMB1P07942 1786 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 ZNF174Q15697 407 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 FILIP1LQ4L180 1135 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 FAM47AQ5JRC9 791 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 SRBD1Q8N5C6 995 aaKnown RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 STAMQ92783 540 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 SMARCC1Q92922 1105 aaPredicted RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 DCP1AQ9NPI6 582 aaPredicted RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 ABHD10Q9NUJ1 306 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 RBM28Q9NW13 759 aaKnown RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 TFCP2L1Q9NZI6 479 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 HDAC6Q9UBN7 1215 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 ADAMTS3O15072 1205 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 ICE2Q659A1 982 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 RIN2Q8WYP3 895 aaPredicted RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
TSPAN12-201ENST00000222747 CCDC88AQ3V6T2 1871 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 ENC1O14682 589 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 SYF2O95926 243 aaKnown RBP16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 CYP2D6P10635 497 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 PRDX5P30044 214 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 PAGE5Q96GU1 130 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 MED4Q9NPJ6 270 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 NUTM2BA6NNL0 878 aaPredicted RBP16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 NUTM2EB1AL46 878 aaPredicted RBP16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 SLC10A5Q5PT55 438 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 GSPT2Q8IYD1 628 aaKnown RBP16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 AFAP1L1Q8TED9 768 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 NUP88Q99567 741 aaPredicted RBP16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 VPS16Q9H269 839 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 GUCA1BQ9UMX6 200 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 TFR2Q9UP52 801 aa16.48■□□□□ 0.23
TSPAN12-201ENST00000222747 PPP1R3GB7ZBB8 358 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 DDAH1O94760 285 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 CORO7P57737 925 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 RPS8P62241 208 aaKnown RBP16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 PTF1AQ7RTS3 328 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 TMTC1Q8IUR5 882 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 CTAGE1Q96RT6 745 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 TAB2Q9NYJ8 693 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 KIAA1551Q9HCM1 1747 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 CALM1P0DP23 149 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 CALM2P0DP24 149 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 CALM3P0DP25 149 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 FECHP22830 423 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 KRT31Q15323 416 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 TXNRD3Q86VQ6 643 aa16.47■□□□□ 0.23
TSPAN12-201ENST00000222747 N4BP3O15049 544 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 ORC4O43929 436 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 SRGAP2O75044 1071 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 ZMYND10O75800 440 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 TUBB4BP68371 445 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 PTGDRQ13258 359 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 TTC38Q5R3I4 469 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 WDR93Q6P2C0 686 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 FERMT2Q96AC1 680 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 CCDC51Q96ER9 411 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 HPCAL4Q9UM19 191 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 CHP1Q99653 195 aa16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 REXO2Q9Y3B8 237 aaKnown RBP16.46■□□□□ 0.23
TSPAN12-201ENST00000222747 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.22
TSPAN12-201ENST00000222747 SEMA3EO15041 775 aa16.45■□□□□ 0.22
TSPAN12-201ENST00000222747 PRPF6O94906 941 aaKnown RBP16.45■□□□□ 0.22
TSPAN12-201ENST00000222747 HIBADHP31937 336 aaKnown RBP16.45■□□□□ 0.22
TSPAN12-201ENST00000222747 CYP26C1Q6V0L0 522 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms