RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 FRMPD2Q68DX3 1309 aaPredicted RBP27.58■■■□□ 2.01
HOMER3-201ENST00000221222 PARP1P09874 1014 aaKnown RBP27.58■■■□□ 2.01
HOMER3-201ENST00000221222 BCRP11274 1271 aa27.58■■■□□ 2.01
HOMER3-201ENST00000221222 GRM4Q14833 912 aa27.58■■■□□ 2.01
HOMER3-201ENST00000221222 APOA5Q6Q788 366 aa27.58■■■□□ 2.01
HOMER3-201ENST00000221222 BRF1Q92994 677 aa27.58■■■□□ 2.01
HOMER3-201ENST00000221222 ATG4CQ96DT6 458 aa27.58■■■□□ 2.01
HOMER3-201ENST00000221222 BRPF3Q9ULD4 1205 aa27.58■■■□□ 2.01
HOMER3-201ENST00000221222 ISY1Q9ULR0 285 aaKnown RBP27.58■■■□□ 2.01
HOMER3-201ENST00000221222 CALM1P0DP23 149 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 CALM2P0DP24 149 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 CALM3P0DP25 149 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 TOB2Q14106 344 aaPredicted RBP27.57■■■□□ 2
HOMER3-201ENST00000221222 MB21D1Q8N884 522 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 GPCPD1Q9NPB8 672 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 CPA4Q9UI42 421 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 MAD2L2Q9UI95 211 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 TRIM17Q9Y577 477 aa27.57■■■□□ 2
HOMER3-201ENST00000221222 PALM3A6NDB9 673 aaPredicted RBP27.56■■■□□ 2
HOMER3-201ENST00000221222 EVCP57679 992 aa27.56■■■□□ 2
HOMER3-201ENST00000221222 TTBK2Q6IQ55 1244 aa27.56■■■□□ 2
HOMER3-201ENST00000221222 MYL10Q9BUA6 226 aa27.56■■■□□ 2
HOMER3-201ENST00000221222 RBPJLQ9UBG7 517 aa27.56■■■□□ 2
HOMER3-201ENST00000221222 MORF4L1Q9UBU8 362 aa27.56■■■□□ 2
HOMER3-201ENST00000221222 TNRC18O15417 2968 aaPredicted RBP27.55■■■□□ 2
HOMER3-201ENST00000221222 KLF18A0A0U1RQI7 1052 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 GOLGA8HP0CJ92 632 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 RCAN1P53805 252 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 FAM110CQ1W6H9 321 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 SYNE3Q6ZMZ3 975 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 CD99L2Q8TCZ2 262 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 NUP133Q8WUM0 1156 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 RABGAP1Q9Y3P9 1069 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 PDE4DIPQ5VU43 2346 aa27.55■■■□□ 2
HOMER3-201ENST00000221222 VWA5AO00534 786 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 CNMDO75829 334 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 FDX1P10109 184 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 APOBRQ0VD83 1088 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 IKQ13123 557 aaPredicted RBP27.54■■■□□ 2
HOMER3-201ENST00000221222 STAG2Q8N3U4 1231 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 ANKRD13CQ8N6S4 541 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 CTCFLQ8NI51 663 aaPredicted RBP27.54■■■□□ 2
HOMER3-201ENST00000221222 KIFC2Q96AC6 838 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 TXNRD2Q9NNW7 524 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 PRR12Q9ULL5 1215 aa27.54■■■□□ 2
HOMER3-201ENST00000221222 ZBTB43O43298 467 aa27.53■■■□□ 2
HOMER3-201ENST00000221222 SLC16A2P36021 539 aa27.53■■■□□ 2
HOMER3-201ENST00000221222 NEK4P51957 841 aa27.53■■■□□ 2
HOMER3-201ENST00000221222 SYDE2Q5VT97 1194 aa27.53■■■□□ 2
HOMER3-201ENST00000221222 OTOP1Q7RTM1 612 aa27.53■■■□□ 2
HOMER3-201ENST00000221222 KIF5BP33176 963 aa27.52■■■□□ 2
HOMER3-201ENST00000221222 SAMD1Q6SPF0 538 aaPredicted RBP27.52■■■□□ 2
HOMER3-201ENST00000221222 MICU3Q86XE3 530 aa27.52■■■□□ 2
HOMER3-201ENST00000221222 REPS2Q8NFH8 660 aa27.52■■■□□ 2
HOMER3-201ENST00000221222 PAGR1Q9BTK6 254 aa27.52■■■□□ 2
HOMER3-201ENST00000221222 SLC38A10Q9HBR0 1119 aa27.52■■■□□ 2
HOMER3-201ENST00000221222 BTBD7Q9P203 1132 aa27.52■■■□□ 2
HOMER3-201ENST00000221222 NID2Q14112 1375 aa27.51■■■□□ 2
HOMER3-201ENST00000221222 KLRF2D3W0D1 207 aa27.51■■□□□ 1.99
HOMER3-201ENST00000221222 ERVK-9P63128 1117 aa27.51■■□□□ 1.99
HOMER3-201ENST00000221222 ERVK-24P63145 666 aa27.51■■□□□ 1.99
HOMER3-201ENST00000221222 ANKRD1Q15327 319 aa27.51■■□□□ 1.99
HOMER3-201ENST00000221222 FANCBQ8NB91 859 aa27.51■■□□□ 1.99
HOMER3-201ENST00000221222 GPRC5AQ8NFJ5 357 aa27.51■■□□□ 1.99
HOMER3-201ENST00000221222 ERO1AQ96HE7 468 aa27.51■■□□□ 1.99
HOMER3-201ENST00000221222 ZBED4O75132 1171 aa27.5■■□□□ 1.99
HOMER3-201ENST00000221222 RXRAP19793 462 aa27.5■■□□□ 1.99
HOMER3-201ENST00000221222 SP3Q02447 781 aa27.5■■□□□ 1.99
HOMER3-201ENST00000221222 RABEP1Q15276 862 aa27.5■■□□□ 1.99
HOMER3-201ENST00000221222 IL27Q8NEV9 243 aa27.5■■□□□ 1.99
HOMER3-201ENST00000221222 UBA5Q9GZZ9 404 aa27.5■■□□□ 1.99
HOMER3-201ENST00000221222 GOLGA8BA8MQT2 603 aa27.49■■□□□ 1.99
HOMER3-201ENST00000221222 ATP2A1O14983 1001 aa27.49■■□□□ 1.99
HOMER3-201ENST00000221222 PEX10O60683 326 aa27.49■■□□□ 1.99
HOMER3-201ENST00000221222 AK2P54819 239 aa27.49■■□□□ 1.99
HOMER3-201ENST00000221222 TMEM132BQ14DG7 1078 aa27.49■■□□□ 1.99
HOMER3-201ENST00000221222 RAB11FIP4Q86YS3 637 aa27.49■■□□□ 1.99
HOMER3-201ENST00000221222 RANBP17Q9H2T7 1088 aaKnown RBP27.49■■□□□ 1.99
HOMER3-201ENST00000221222 ZNF214Q9UL59 606 aaPredicted RBP27.49■■□□□ 1.99
HOMER3-201ENST00000221222 MGAMO43451 1857 aa27.49■■□□□ 1.99
HOMER3-201ENST00000221222 GNAQP50148 359 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 OAZ1P54368 228 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 CAP1Q01518 475 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 PPP2R5BQ15173 497 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 Q3C1V9 767 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 CCDC144CPQ8IYA2 1237 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 ZNF274Q96GC6 653 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-201ENST00000221222 LZTS2Q9BRK4 669 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 CPVLQ9H3G5 476 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 RBM28Q9NW13 759 aaKnown RBP27.48■■□□□ 1.99
HOMER3-201ENST00000221222 SMARCA1P28370 1054 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 PDIA3P30101 505 aaKnown RBP27.48■■□□□ 1.99
HOMER3-201ENST00000221222 LACTBP83111 547 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-201ENST00000221222 ADGRF4Q8IZF3 695 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 SPATC1LQ9H0A9 340 aa27.48■■□□□ 1.99
HOMER3-201ENST00000221222 NAP1L2Q9ULW6 460 aaPredicted RBP27.48■■□□□ 1.99
HOMER3-201ENST00000221222 GOLGA8AA7E2F4 631 aa27.47■■□□□ 1.99
HOMER3-201ENST00000221222 METAP2P50579 478 aaKnown RBP eCLIP27.47■■□□□ 1.99
HOMER3-201ENST00000221222 CCNA1P78396 465 aa27.47■■□□□ 1.99
HOMER3-201ENST00000221222 RTN1Q16799 776 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms