RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ZNF232Q9UNY5 417 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 CDKL5O76039 1030 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 SLC8A1P32418 973 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 PDIA5Q14554 519 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 ERFEQ4G0M1 354 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 HHATQ5VTY9 493 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 CAPRIN2Q6IMN6 1127 aaKnown RBP15.25■□□□□ 0.03
GABPB1-201ENST00000220429 NCAPG2Q86XI2 1143 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 CCDC13Q8IYE1 715 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 C8orf76Q96K31 380 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 SCLT1Q96NL6 688 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 PCDHGA4Q9Y5G9 962 aa15.25■□□□□ 0.03
GABPB1-201ENST00000220429 CPLX1O14810 134 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 GJB4Q9NTQ9 266 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.24■□□□□ 0.03
GABPB1-201ENST00000220429 TACC3Q9Y6A5 838 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 ECM29Q5VYK3 1845 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 IMPDH2P12268 514 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 GGCXP38435 758 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 EZH1Q92800 747 aaPredicted RBP15.24■□□□□ 0.03
GABPB1-201ENST00000220429 HOOK2Q96ED9 719 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 GOLPH3LQ9H4A5 285 aa15.24■□□□□ 0.03
GABPB1-201ENST00000220429 GSG1L2A8MUP6 293 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 PRKAB2O43741 272 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 CTDSPL2Q05D32 466 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 STIM1Q13586 685 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 LAMB3Q13751 1172 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 CCDC181Q5TID7 509 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 WDR93Q6P2C0 686 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 SMIM5Q71RC9 77 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 PTF1AQ7RTS3 328 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 TMEM139Q8IV31 216 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 CCAR1Q8IX12 1150 aaKnown RBP15.23■□□□□ 0.03
GABPB1-201ENST00000220429 IGDCC4Q8TDY8 1250 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 CDC5LQ99459 802 aaKnown RBP15.23■□□□□ 0.03
GABPB1-201ENST00000220429 NAPBQ9H115 298 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 ZC3H4Q9UPT8 1303 aaKnown RBP15.23■□□□□ 0.03
GABPB1-201ENST00000220429 RXRAP19793 462 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 LCORLQ8N3X6 602 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 G3BP2Q9UN86 482 aaKnown RBP15.23■□□□□ 0.03
GABPB1-201ENST00000220429 IQSEC3Q9UPP2 1182 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-201ENST00000220429 SCN7AQ01118 1682 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 WTIPA6NIX2 430 aaPredicted RBP15.23■□□□□ 0.03
GABPB1-201ENST00000220429 FANCCQ00597 558 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 GOLGA8FQ08AF8 430 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 GOLGA8DPQ0D2H9 430 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 TUBB2AQ13885 445 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 CYB5D1Q6P9G0 228 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 APOA5Q6Q788 366 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 BPIFA3Q9BQP9 254 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 TUBB2BQ9BVA1 445 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 SLC39A2Q9NP94 309 aa15.23■□□□□ 0.03
GABPB1-201ENST00000220429 TOM1O60784 492 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 METAP2P50579 478 aaKnown RBP eCLIP15.22■□□□□ 0.03
GABPB1-201ENST00000220429 SF3B3Q15393 1217 aaKnown RBP15.22■□□□□ 0.03
GABPB1-201ENST00000220429 RNF187Q5TA31 235 aaPredicted RBP15.22■□□□□ 0.03
GABPB1-201ENST00000220429 ARMCX6Q7L4S7 300 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 TMEM87BQ96K49 555 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 GOPCQ9HD26 462 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 RTEL1Q9NZ71 1219 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 AHCYL1O43865 530 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 ZEB2O60315 1214 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 FESP07332 822 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 PYGBP11216 843 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 CDC27P30260 824 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 KARSQ15046 597 aaKnown RBP15.22■□□□□ 0.03
GABPB1-201ENST00000220429 MIS18BP1Q6P0N0 1132 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 SPATA21Q7Z572 469 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
GABPB1-201ENST00000220429 TPX2Q9ULW0 747 aaKnown RBP15.22■□□□□ 0.03
GABPB1-201ENST00000220429 ZNF804BA4D1E1 1349 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 PNPLA7Q6ZV29 1317 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 KIF28PB7ZC32 967 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 POLR3DP05423 398 aaPredicted RBP15.21■□□□□ 0.03
GABPB1-201ENST00000220429 SF3B2Q13435 895 aaKnown RBP15.21■□□□□ 0.03
GABPB1-201ENST00000220429 VPS72Q15906 364 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 BICDL1Q6ZP65 573 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 TOGARAM2Q6ZUX3 1019 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 ENGASEQ8NFI3 743 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 NUP133Q8WUM0 1156 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 ZSWIM5Q9P217 1185 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.03
GABPB1-201ENST00000220429 BTAF1O14981 1849 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 CTAGE15A4D2H0 777 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 CTAGE8P0CG41 777 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 GYG1P46976 350 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 ME1P48163 572 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 SLC30A9Q6PML9 568 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 CTAGE6Q86UF2 777 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 SGMS1Q86VZ5 419 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 MICU3Q86XE3 530 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 CTAGE4Q8IX94 777 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 MIGA1Q8NAN2 632 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 COG1Q8WTW3 980 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 CCDC97Q96F63 343 aaPredicted RBP15.21■□□□□ 0.02
GABPB1-201ENST00000220429 AIFM3Q96NN9 605 aa15.21■□□□□ 0.02
GABPB1-201ENST00000220429 LRP2BPQ9P2M1 347 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms