RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 SLF1Q9BQI6 1058 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 HOXC10Q9NYD6 342 aa15.32■□□□□ 0.04
TIMP1-201ENST00000218388 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
TIMP1-201ENST00000218388 PARP14Q460N5 1801 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 PFKFB2O60825 505 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 SMARCA1P28370 1054 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 STK3Q13188 491 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 BTNL9Q6UXG8 535 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 SMCR8Q8TEV9 937 aaPredicted RBP15.31■□□□□ 0.04
TIMP1-201ENST00000218388 SNX21Q969T3 373 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 PTPN18Q99952 460 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 ASCC2Q9H1I8 757 aaPredicted RBP15.31■□□□□ 0.04
TIMP1-201ENST00000218388 PPP1R9AQ9ULJ8 1098 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
TIMP1-201ENST00000218388 IGF2BP3O00425 579 aaKnown RBP eCLIP15.3■□□□□ 0.04
TIMP1-201ENST00000218388 CDKL5O76039 1030 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 DSG3P32926 999 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 CCT2P78371 535 aaKnown RBP15.3■□□□□ 0.04
TIMP1-201ENST00000218388 TAF1CQ15572 869 aaPredicted RBP15.3■□□□□ 0.04
TIMP1-201ENST00000218388 ME3Q16798 604 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 TTBK2Q6IQ55 1244 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
TIMP1-201ENST00000218388 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 STAG2Q8N3U4 1231 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 MB21D1Q8N884 522 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 KIFC2Q96AC6 838 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 ZIC5Q96T25 663 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 SPZ1Q9BXG8 430 aa15.3■□□□□ 0.04
TIMP1-201ENST00000218388 ZBED4O75132 1171 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 SLC16A2P36021 539 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 HERVK_113P62684 666 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 SCRN1Q12765 414 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 UBA5Q9GZZ9 404 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 ZFYVE28Q9HCC9 887 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 FBXO28Q9NVF7 368 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 RBM27Q9P2N5 1060 aaKnown RBP15.29■□□□□ 0.04
TIMP1-201ENST00000218388 PNMA2Q9UL42 364 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 PRR12Q9ULL5 1215 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 RLFQ13129 1914 aa15.29■□□□□ 0.04
TIMP1-201ENST00000218388 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
TIMP1-201ENST00000218388 CD2BP2O95400 341 aaKnown RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 CDC27P30260 824 aa15.28■□□□□ 0.04
TIMP1-201ENST00000218388 ADD1P35611 737 aaKnown RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 GCLCP48506 637 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 AKAP17AQ02040 695 aaKnown RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 MAP2K1Q02750 393 aaPredicted RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 LBX2Q6XYB7 198 aa15.28■□□□□ 0.04
TIMP1-201ENST00000218388 TRIM22Q8IYM9 498 aa15.28■□□□□ 0.04
TIMP1-201ENST00000218388 ADGRF4Q8IZF3 695 aa15.28■□□□□ 0.04
TIMP1-201ENST00000218388 TMX3Q96JJ7 454 aa15.28■□□□□ 0.04
TIMP1-201ENST00000218388 P2RX7Q99572 595 aaKnown RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 BEGAINQ9BUH8 593 aa15.28■□□□□ 0.04
TIMP1-201ENST00000218388 NCOA5Q9HCD5 579 aaKnown RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 SEC63Q9UGP8 760 aaKnown RBP15.28■□□□□ 0.04
TIMP1-201ENST00000218388 A0A0G2JMZ2 1700 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 CA12O43570 354 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 LARGE1O95461 756 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 CYP2C8P10632 490 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 IFNAR1P17181 557 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 TRAF1Q13077 416 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 BECN1Q14457 450 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 SRBD1Q8N5C6 995 aaKnown RBP15.27■□□□□ 0.04
TIMP1-201ENST00000218388 NECAB1Q8N987 351 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 ATG4CQ96DT6 458 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 RRP36Q96EU6 259 aaKnown RBP15.27■□□□□ 0.04
TIMP1-201ENST00000218388 RIOX1Q9H6W3 641 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 VAT1LQ9HCJ6 419 aa15.27■□□□□ 0.04
TIMP1-201ENST00000218388 FAM217BQ9NTX9 383 aaPredicted RBP15.27■□□□□ 0.04
TIMP1-201ENST00000218388 MYH6P13533 1939 aa15.27■□□□□ 0.03
TIMP1-201ENST00000218388 CNTNAP5Q8WYK1 1306 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 VWA5AO00534 786 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 ANP32AP39687 249 aaKnown RBP15.26■□□□□ 0.03
TIMP1-201ENST00000218388 OAZ1P54368 228 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 CDC37Q16543 378 aaPredicted RBP15.26■□□□□ 0.03
TIMP1-201ENST00000218388 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 CCDC82Q8N4S0 544 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 LLPHQ9BRT6 129 aaKnown RBP15.26■□□□□ 0.03
TIMP1-201ENST00000218388 RNF26Q9BY78 433 aaPredicted RBP15.26■□□□□ 0.03
TIMP1-201ENST00000218388 RANBP17Q9H2T7 1088 aaKnown RBP15.26■□□□□ 0.03
TIMP1-201ENST00000218388 CPVLQ9H3G5 476 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 SLC38A10Q9HBR0 1119 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 ADAMTS5Q9UNA0 930 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 RABGAP1Q9Y3P9 1069 aa15.26■□□□□ 0.03
TIMP1-201ENST00000218388 COL11A1P12107 1806 aaPredicted RBP15.26■□□□□ 0.03
TIMP1-201ENST00000218388 ZBTB5O15062 677 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 TLR2O60603 784 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 SSRP1Q08945 709 aaKnown RBP15.25■□□□□ 0.03
TIMP1-201ENST00000218388 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 CMTR1Q8N1G2 835 aaKnown RBP15.25■□□□□ 0.03
TIMP1-201ENST00000218388 PAGR1Q9BTK6 254 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 SLC26A6Q9BXS9 759 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 SAGE1Q9NXZ1 904 aa15.25■□□□□ 0.03
TIMP1-201ENST00000218388 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms