RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 DHX16O60231 1041 aaKnown RBP31.68■■■□□ 2.66
CHMP4B-201ENST00000217402 HOXA7P31268 230 aaPredicted RBP31.68■■■□□ 2.66
CHMP4B-201ENST00000217402 GNAQP50148 359 aa31.68■■■□□ 2.66
CHMP4B-201ENST00000217402 IRX3P78415 501 aaPredicted RBP31.68■■■□□ 2.66
CHMP4B-201ENST00000217402 PABPC4Q13310 644 aaKnown RBP eCLIP31.68■■■□□ 2.662e-12■■■■■ 29.9
CHMP4B-201ENST00000217402 PPP2R5BQ15173 497 aa31.68■■■□□ 2.66
CHMP4B-201ENST00000217402 SLF1Q9BQI6 1058 aa31.68■■■□□ 2.66
CHMP4B-201ENST00000217402 CPLX1O14810 134 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 PPFIA3O75145 1194 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 SRBD1Q8N5C6 995 aaKnown RBP31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 CHURC1Q8WUH1 139 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 ASCC2Q9H1I8 757 aaPredicted RBP31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 DTNBO60941 627 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 INHBEP58166 350 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 SLC35G1Q2M3R5 365 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 SYDE2Q5VT97 1194 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 FAM160B2Q86V87 743 aa31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 RBM19Q9Y4C8 960 aaKnown RBP31.67■■■□□ 2.66
CHMP4B-201ENST00000217402 BTNL9Q6UXG8 535 aa31.66■■■□□ 2.66
CHMP4B-201ENST00000217402 IFNL1Q8IU54 200 aa31.66■■■□□ 2.66
CHMP4B-201ENST00000217402 LZTS2Q9BRK4 669 aa31.66■■■□□ 2.66
CHMP4B-201ENST00000217402 VAT1LQ9HCJ6 419 aa31.66■■■□□ 2.66
CHMP4B-201ENST00000217402 PPP1R9AQ9ULJ8 1098 aa31.66■■■□□ 2.66
CHMP4B-201ENST00000217402 PRR12Q9ULL5 1215 aa31.66■■■□□ 2.66
CHMP4B-201ENST00000217402 OSBPP22059 807 aa31.65■■■□□ 2.66
CHMP4B-201ENST00000217402 COG2Q14746 738 aa31.65■■■□□ 2.66
CHMP4B-201ENST00000217402 ADGRF4Q8IZF3 695 aa31.65■■■□□ 2.66
CHMP4B-201ENST00000217402 PIBF1Q8WXW3 757 aa31.65■■■□□ 2.66
CHMP4B-201ENST00000217402 CYTH3O43739 400 aa31.64■■■□□ 2.66
CHMP4B-201ENST00000217402 PLA2G6O60733 806 aa31.64■■■□□ 2.66
CHMP4B-201ENST00000217402 CYP2C8P10632 490 aa31.64■■■□□ 2.66
CHMP4B-201ENST00000217402 ANP32AP39687 249 aaKnown RBP31.64■■■□□ 2.66
CHMP4B-201ENST00000217402 SLC45A1Q9Y2W3 748 aa31.64■■■□□ 2.66
CHMP4B-201ENST00000217402 TM4SF4P48230 202 aa31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 SNAP25P60880 206 aa31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 NTRK3Q16288 839 aa31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 CPLX2Q6PUV4 134 aaKnown RBP31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 PRPF38AQ8NAV1 312 aaKnown RBP31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 PHKBQ93100 1093 aa31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 ATG4CQ96DT6 458 aa31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 P2RX7Q99572 595 aaKnown RBP31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 PNMA3Q9UL41 463 aa31.64■■■□□ 2.65
CHMP4B-201ENST00000217402 CNTNAP5Q8WYK1 1306 aa31.63■■■□□ 2.65
CHMP4B-201ENST00000217402 SPDYE16A6NNV3 312 aaPredicted RBP31.63■■■□□ 2.65
CHMP4B-201ENST00000217402 DSG3P32926 999 aa31.63■■■□□ 2.65
CHMP4B-201ENST00000217402 FUT2Q10981 343 aa31.63■■■□□ 2.65
CHMP4B-201ENST00000217402 SPZ1Q9BXG8 430 aa31.63■■■□□ 2.65
CHMP4B-201ENST00000217402 CTDNEP1O95476 244 aa31.62■■■□□ 2.65
CHMP4B-201ENST00000217402 HOMER1Q86YM7 354 aa31.62■■■□□ 2.65
CHMP4B-201ENST00000217402 JMJD4Q9H9V9 463 aa31.62■■■□□ 2.65
CHMP4B-201ENST00000217402 PARP14Q460N5 1801 aa31.62■■■□□ 2.65
CHMP4B-201ENST00000217402 hCG_1642624A0A1W2PR95 340 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 IFNAR1P17181 557 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 MAP2K2P36507 400 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 HERVK_113P62684 666 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 OTUD7BQ6GQQ9 843 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 RIOX1Q9H6W3 641 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 HOXC10Q9NYD6 342 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 RLFQ13129 1914 aa31.61■■■□□ 2.65
CHMP4B-201ENST00000217402 SMCR8Q8TEV9 937 aaPredicted RBP31.6■■■□□ 2.65
CHMP4B-201ENST00000217402 PARK7Q99497 189 aaKnown RBP31.6■■■□□ 2.65
CHMP4B-201ENST00000217402 SLC26A6Q9BXS9 759 aa31.6■■■□□ 2.65
CHMP4B-201ENST00000217402 MYPNQ86TC9 1320 aa31.6■■■□□ 2.65
CHMP4B-201ENST00000217402 CDKL5O76039 1030 aa31.6■■■□□ 2.65
CHMP4B-201ENST00000217402 BECN1Q14457 450 aa31.6■■■□□ 2.65
CHMP4B-201ENST00000217402 PIGSQ96S52 555 aa31.6■■■□□ 2.65
CHMP4B-201ENST00000217402 VWA5AO00534 786 aa31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 JAK2O60674 1132 aa31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 SMARCA1P28370 1054 aa31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 TAF1CQ15572 869 aaPredicted RBP31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 CDC37Q16543 378 aaPredicted RBP31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 REM2Q8IYK8 340 aaPredicted RBP31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 NSUN7Q8NE18 718 aaKnown RBP31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 ZCCHC17Q9NP64 241 aaKnown RBP31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 THSD7BQ9C0I4 1608 aa31.59■■■□□ 2.65
CHMP4B-201ENST00000217402 PTPDC1A2A3K4 754 aa31.58■■■□□ 2.65
CHMP4B-201ENST00000217402 CCDC174Q6PII3 467 aa31.58■■■□□ 2.65
CHMP4B-201ENST00000217402 RRP36Q96EU6 259 aaKnown RBP31.58■■■□□ 2.65
CHMP4B-201ENST00000217402 CTDP1Q9Y5B0 961 aaPredicted RBP31.58■■■□□ 2.65
CHMP4B-201ENST00000217402 V9GY48 417 aaPredicted RBP31.58■■■□□ 2.65
CHMP4B-201ENST00000217402 BAZ2BQ9UIF8 2168 aaKnown RBP31.58■■■□□ 2.65
CHMP4B-201ENST00000217402 CUL4AQ13619 759 aa31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 RANBP17Q9H2T7 1088 aaKnown RBP31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 SSRP1Q08945 709 aaKnown RBP31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 TRIM22Q8IYM9 498 aa31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 DDX11Q96FC9 970 aa31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 PAGR1Q9BTK6 254 aa31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 SLC38A10Q9HBR0 1119 aa31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 FOXD4L1Q9NU39 408 aa31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 SEC63Q9UGP8 760 aaKnown RBP31.57■■■□□ 2.64
CHMP4B-201ENST00000217402 PEX10O60683 326 aa31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 ZBED4O75132 1171 aa31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 FMNL1O95466 1100 aaPredicted RBP31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 AKAP17AQ02040 695 aaKnown RBP31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 QRICH1Q2TAL8 776 aa31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 POTEEQ6S8J3 1075 aa31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 LLPHQ9BRT6 129 aaKnown RBP31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 RNF26Q9BY78 433 aaPredicted RBP31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 ADAMTS5Q9UNA0 930 aa31.56■■■□□ 2.64
CHMP4B-201ENST00000217402 MTMR8Q96EF0 704 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms