RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 RTN4Q9NQC3 1192 aaKnown RBP19.85■□□□□ 0.77
VRK1-201ENST00000216639 NYAP2Q9P242 653 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 ESYT2A0FGR8 921 aa19.84■□□□□ 0.77
VRK1-201ENST00000216639 SMCO2A6NFE2 343 aa19.84■□□□□ 0.77
VRK1-201ENST00000216639 SPDYE2BA6NHP3 402 aa19.84■□□□□ 0.77
VRK1-201ENST00000216639 GOLGA6L6A8MZA4 724 aa19.84■□□□□ 0.77
VRK1-201ENST00000216639 SPDYE6P0CI01 402 aa19.84■□□□□ 0.77
VRK1-201ENST00000216639 MCM7P33993 719 aa19.84■□□□□ 0.77
VRK1-201ENST00000216639 DALRD3Q5D0E6 543 aaKnown RBP19.84■□□□□ 0.77
VRK1-201ENST00000216639 ARL6IP4Q66PJ3 421 aaKnown RBP19.84■□□□□ 0.77
VRK1-201ENST00000216639 METTL16Q86W50 562 aaKnown RBP19.84■□□□□ 0.77
VRK1-201ENST00000216639 CLEC10AQ8IUN9 316 aa19.84■□□□□ 0.77
VRK1-201ENST00000216639 PYM1Q9BRP8 204 aaKnown RBP19.84■□□□□ 0.77
VRK1-201ENST00000216639 RRAGDQ9NQL2 400 aaPredicted RBP19.84■□□□□ 0.77
VRK1-201ENST00000216639 CCDC96Q2M329 555 aa19.83■□□□□ 0.77
VRK1-201ENST00000216639 AGBL3Q8NEM8 1001 aa19.83■□□□□ 0.77
VRK1-201ENST00000216639 MKL1Q969V6 931 aa19.83■□□□□ 0.77
VRK1-201ENST00000216639 GMLQ99445 158 aa19.83■□□□□ 0.77
VRK1-201ENST00000216639 GPCPD1Q9NPB8 672 aa19.83■□□□□ 0.77
VRK1-201ENST00000216639 SIPA1L1O43166 1804 aa19.83■□□□□ 0.76
VRK1-201ENST00000216639 WNT7AO00755 349 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 TPM3P06753 285 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 TPM4P67936 248 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 PNOCQ13519 176 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 ABCB5Q2M3G0 1257 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 TRIM5Q9C035 493 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 VWA3AA6NCI4 1184 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 BIN1O00499 593 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 AP5Z1O43299 807 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 NONOQ15233 471 aaKnown RBP eCLIP19.82■□□□□ 0.76
VRK1-201ENST00000216639 DPCR1Q3MIW9 517 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 RASGRP4Q8TDF6 673 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 DCAF4Q8WV16 495 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 CSRNP1Q96S65 589 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 SERTAD1Q9UHV2 236 aa19.82■□□□□ 0.76
VRK1-201ENST00000216639 HERC5Q9UII4 1024 aaKnown RBP19.82■□□□□ 0.76
VRK1-201ENST00000216639 ATF5Q9Y2D1 282 aaPredicted RBP19.82■□□□□ 0.76
VRK1-201ENST00000216639 PNMA6FA0A0J9YX94 578 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 FAM196BA6NMK8 535 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 SMTNL1A8MU46 457 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 LAD1O00515 517 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 EEF2P13639 858 aaKnown RBP19.81■□□□□ 0.76
VRK1-201ENST00000216639 POSTNQ15063 836 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 RBM26Q5T8P6 1007 aaKnown RBP19.81■□□□□ 0.76
VRK1-201ENST00000216639 PPP1R18Q6NYC8 613 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 SARM1Q6SZW1 724 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.81■□□□□ 0.76
VRK1-201ENST00000216639 DHX40Q8IX18 779 aaKnown RBP19.81■□□□□ 0.76
VRK1-201ENST00000216639 SYMPKQ92797 1274 aaKnown RBP19.81■□□□□ 0.76
VRK1-201ENST00000216639 ZKSCAN5Q9Y2L8 839 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 MYH4Q9Y623 1939 aa19.81■□□□□ 0.76
VRK1-201ENST00000216639 ADAMTS3O15072 1205 aa19.8■□□□□ 0.76
VRK1-201ENST00000216639 CLCN1P35523 988 aa19.8■□□□□ 0.76
VRK1-201ENST00000216639 ICA1Q05084 483 aa19.8■□□□□ 0.76
VRK1-201ENST00000216639 AOPEPQ8N6M6 819 aa19.8■□□□□ 0.76
VRK1-201ENST00000216639 PDILTQ8N807 584 aa19.8■□□□□ 0.76
VRK1-201ENST00000216639 JDP2Q8WYK2 163 aa19.8■□□□□ 0.76
VRK1-201ENST00000216639 TAOK3Q9H2K8 898 aa19.8■□□□□ 0.76
VRK1-201ENST00000216639 ZNF70Q9UC06 446 aaPredicted RBP19.8■□□□□ 0.76
VRK1-201ENST00000216639 A0A087WWV3 80 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 MYO1BO43795 1136 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 LONP1P36776 959 aaKnown RBP19.79■□□□□ 0.76
VRK1-201ENST00000216639 TXLNAP40222 546 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 MDM2Q00987 491 aaPredicted RBP19.79■□□□□ 0.76
VRK1-201ENST00000216639 INF2Q27J81 1249 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 ADGRF4Q8IZF3 695 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 REXO1Q8N1G1 1221 aaKnown RBP19.79■□□□□ 0.76
VRK1-201ENST00000216639 MTMR14Q8NCE2 650 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 FAM151AQ8WW52 585 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 EPSTI1Q96J88 318 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 PCDHA5Q9Y5H7 936 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 TCP10L2B9ZVM9 353 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 ACTN4O43707 911 aaKnown RBP19.79■□□□□ 0.76
VRK1-201ENST00000216639 SMC2O95347 1197 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 SLC1A4P43007 532 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 ZNF75DP51815 510 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 ADCY7P51828 1080 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 SEPT2Q15019 361 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 FKBP1CQ5VVH2 108 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 SLFN13Q68D06 897 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 USP49Q70CQ1 688 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 SMARCE1Q969G3 411 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 DHX58Q96C10 678 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 JMJD4Q9H9V9 463 aa19.79■□□□□ 0.76
VRK1-201ENST00000216639 ZBTB12Q9Y330 459 aaPredicted RBP19.79■□□□□ 0.76
VRK1-201ENST00000216639 COL4A5P29400 1685 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 SLFN14P0C7P3 912 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 SLURP2P0DP57 97 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 MMP14P50281 582 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 ORC2Q13416 577 aaPredicted RBP19.78■□□□□ 0.76
VRK1-201ENST00000216639 SPDYE2Q495Y8 402 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 DTHD1Q6ZMT9 781 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 PLA2G4DQ86XP0 818 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 TRIML1Q8N9V2 468 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.78■□□□□ 0.761e-7■■■■■ 36.7
VRK1-201ENST00000216639 DACH1Q9UI36 760 aa19.78■□□□□ 0.76
VRK1-201ENST00000216639 CLRN2A0PK11 232 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 ZBTB5O15062 677 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 RAD21O60216 631 aa19.77■□□□□ 0.76
VRK1-201ENST00000216639 GDF11O95390 407 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms