RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 UIMC1Q96RL1 719 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 PARD6BQ9BYG5 372 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
SRRD-201ENST00000215917 CCZ1BP86790 482 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 CCZ1P86791 482 aaPredicted RBP16.8■□□□□ 0.28
SRRD-201ENST00000215917 PRPF4BQ13523 1007 aaKnown RBP16.8■□□□□ 0.28
SRRD-201ENST00000215917 EARS2Q5JPH6 523 aaKnown RBP16.8■□□□□ 0.28
SRRD-201ENST00000215917 PIK3AP1Q6ZUJ8 805 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 KRT27Q7Z3Y8 459 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 DYNLL2Q96FJ2 89 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 MKNK2Q9HBH9 465 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 LONRF2Q1L5Z9 754 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 ARMCX5Q6P1M9 558 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 NDUFAB1O14561 156 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 RIMBP2O15034 1052 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 CDC25BP30305 580 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 GPSM2P81274 684 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 CACNA2D4Q7Z3S7 1137 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 RASGRP4Q8TDF6 673 aa16.8■□□□□ 0.28
SRRD-201ENST00000215917 COL5A3P25940 1745 aaPredicted RBP16.79■□□□□ 0.28
SRRD-201ENST00000215917 GOLGA6L9A6NEM1 432 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 KRT2P35908 639 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 PAFAH1B1P43034 410 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 GPKOWQ92917 476 aaPredicted RBP eCLIP16.79■□□□□ 0.28
SRRD-201ENST00000215917 CDK5RAP3Q96JB5 506 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 TRIM47Q96LD4 638 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 LDHBP07195 334 aaKnown RBP16.79■□□□□ 0.28
SRRD-201ENST00000215917 SLFN14P0C7P3 912 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 VEGFAP15692 232 aaPredicted RBP16.79■□□□□ 0.28
SRRD-201ENST00000215917 STIM1Q13586 685 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
SRRD-201ENST00000215917 AKR1B15C9JRZ8 316 aaPredicted RBP16.79■□□□□ 0.28
SRRD-201ENST00000215917 CCT5P48643 541 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 NCAPHQ15003 741 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 SPTY2D1Q68D10 685 aaPredicted RBP16.79■□□□□ 0.28
SRRD-201ENST00000215917 KCTD16Q68DU8 428 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 BLZF1Q9H2G9 400 aa16.79■□□□□ 0.28
SRRD-201ENST00000215917 TMCO5BA8MYB1 307 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 UBXN1Q04323 297 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 TAB2Q9NYJ8 693 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 LRRN4CLQ8ND94 238 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 AFAP1L1Q8TED9 768 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 CPVLQ9H3G5 476 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 VAT1LQ9HCJ6 419 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 ADAM21Q9UKJ8 722 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 F8W031 263 aaPredicted RBP16.78■□□□□ 0.28
SRRD-201ENST00000215917 SLC44A5Q8NCS7 719 aa16.78■□□□□ 0.28
SRRD-201ENST00000215917 IFFO1Q0D2I5 559 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 CEP112Q8N8E3 955 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 MAN1B1Q9UKM7 699 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 TLDC2A0PJX2 215 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 WNT7AO00755 349 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 KRT18P05783 430 aaKnown RBP16.77■□□□□ 0.28
SRRD-201ENST00000215917 GBP2P32456 591 aaPredicted RBP16.77■□□□□ 0.28
SRRD-201ENST00000215917 NOP2P46087 812 aaKnown RBP16.77■□□□□ 0.28
SRRD-201ENST00000215917 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
SRRD-201ENST00000215917 TGFBRAP1Q8WUH2 860 aa16.77■□□□□ 0.28
SRRD-201ENST00000215917 SAMSN1Q9NSI8 373 aaKnown RBP16.77■□□□□ 0.28
SRRD-201ENST00000215917 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.27
SRRD-201ENST00000215917 FBXO2Q9UK22 296 aaPredicted RBP16.77■□□□□ 0.27
SRRD-201ENST00000215917 ARHGAP6O43182 974 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 TFAP4Q01664 338 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 SND1Q7KZF4 910 aaKnown RBP eCLIP16.76■□□□□ 0.27
SRRD-201ENST00000215917 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 FAM76AQ8TAV0 307 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 FOXP1Q9H334 677 aaPredicted RBP16.76■□□□□ 0.27
SRRD-201ENST00000215917 GOLGA8HP0CJ92 632 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 PTPREP23469 700 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 KRT9P35527 623 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 FMR1Q06787 632 aaKnown RBP eCLIP16.76■□□□□ 0.27
SRRD-201ENST00000215917 DDR1Q08345 913 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 ANKRD13CQ8N6S4 541 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 SYMPKQ92797 1274 aaKnown RBP16.76■□□□□ 0.27
SRRD-201ENST00000215917 FAM204AQ9H8W3 233 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 HPSEQ9Y251 543 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 KAT14Q9H8E8 782 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 MMRN2Q9H8L6 949 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 TMEM51Q9NW97 253 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 RREB1Q92766 1687 aa16.76■□□□□ 0.27
SRRD-201ENST00000215917 BMP6P22004 513 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 SUGCTQ9HAC7 445 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 XDHP47989 1333 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 PTGDRQ13258 359 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 GBP6Q6ZN66 633 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 DYDC1Q8WWB3 177 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 CICQ96RK0 1608 aaPredicted RBP16.75■□□□□ 0.27
SRRD-201ENST00000215917 USP17L3A6NCW0 530 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 USP17L4A6NCW7 530 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 GOLGA6DP0CG33 693 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 NAA25Q14CX7 972 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 USP17L1Q7RTZ2 530 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 ANKRD7Q92527 254 aa16.75■□□□□ 0.27
SRRD-201ENST00000215917 BRIP1Q9BX63 1249 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms