RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SETDB2Q96T68 719 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 JADE2Q9NQC1 790 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 A0A1B0GTH6 734 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 H3BQF6 201 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 TBX2Q13207 712 aaPredicted RBP16.98■□□□□ 0.31
EFNB1-201ENST00000204961 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 AMIGO3Q86WK7 504 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
EFNB1-201ENST00000204961 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 ERVV-1B6SEH8 477 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 TXLNAP40222 546 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 NAPAP54920 295 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 CCDC122Q5T0U0 273 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 DTHD1Q6ZMT9 781 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 PLEKP08567 350 aaPredicted RBP16.97■□□□□ 0.31
EFNB1-201ENST00000204961 TTC19Q6DKK2 380 aaPredicted RBP16.97■□□□□ 0.31
EFNB1-201ENST00000204961 DNAAF5Q86Y56 855 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 BLIDQ8IZY5 108 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 CCDC155Q8N6L0 562 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 LINC00116Q8NCU8 138 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 KIFC2Q96AC6 838 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 EHD2Q9NZN4 543 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 RTL9Q8NET4 1388 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 PRPF3O43395 683 aaKnown RBP16.97■□□□□ 0.31
EFNB1-201ENST00000204961 VSNL1P62760 191 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 GPCPD1Q9NPB8 672 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 WDR19Q8NEZ3 1342 aa16.97■□□□□ 0.31
EFNB1-201ENST00000204961 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
EFNB1-201ENST00000204961 COA7Q96BR5 231 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 PCNTO95613 3336 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 PDE4DQ08499 809 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 NPY5RQ15761 445 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 CSGALNACT2Q8N6G5 542 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 CRACR2AQ9BSW2 395 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 MAGEC2Q9UBF1 373 aaPredicted RBP16.96■□□□□ 0.31
EFNB1-201ENST00000204961 CNTNAP5Q8WYK1 1306 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 FUT2Q10981 343 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 LRRC47Q8N1G4 583 aaKnown RBP16.96■□□□□ 0.31
EFNB1-201ENST00000204961 MMRN2Q9H8L6 949 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 CALCOCO1Q9P1Z2 691 aa16.96■□□□□ 0.31
EFNB1-201ENST00000204961 STK36Q9NRP7 1315 aa16.96■□□□□ 0.3
EFNB1-201ENST00000204961 ABCC6O95255 1503 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 ZNF652Q9Y2D9 606 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 BCL9O00512 1426 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 TJP1Q07157 1748 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 PROCA1Q8NCQ7 364 aaPredicted RBP16.95■□□□□ 0.3
EFNB1-201ENST00000204961 ABHD10Q9NUJ1 306 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 LUC7L2Q9Y383 392 aaKnown RBP16.95■□□□□ 0.3
EFNB1-201ENST00000204961 CTAGE15A4D2H0 777 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 CTAGE8P0CG41 777 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 APBA1Q02410 837 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 APTXQ7Z2E3 356 aaKnown RBP16.95■□□□□ 0.3
EFNB1-201ENST00000204961 CTAGE6Q86UF2 777 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 CTAGE4Q8IX94 777 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
EFNB1-201ENST00000204961 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 FAN1Q9Y2M0 1017 aa16.95■□□□□ 0.3
EFNB1-201ENST00000204961 MYH8P13535 1937 aa16.94■□□□□ 0.3
EFNB1-201ENST00000204961 FAM196BA6NMK8 535 aa16.94■□□□□ 0.3
EFNB1-201ENST00000204961 TCP11X2Q5H9J9 407 aa16.94■□□□□ 0.3
EFNB1-201ENST00000204961 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
EFNB1-201ENST00000204961 TMC4Q7Z404 712 aa16.94■□□□□ 0.3
EFNB1-201ENST00000204961 C10orf67Q8IYJ2 551 aa16.94■□□□□ 0.3
EFNB1-201ENST00000204961 NLRC4Q9NPP4 1024 aa16.94■□□□□ 0.3
EFNB1-201ENST00000204961 EPN1Q9Y6I3 576 aaPredicted RBP16.94■□□□□ 0.3
EFNB1-201ENST00000204961 KLRF2D3W0D1 207 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 MPHOSPH10O00566 681 aaKnown RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 ATP1A1P05023 1023 aaKnown RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 CAPN2P17655 700 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 PLCG1P19174 1290 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 ERCC5P28715 1186 aaPredicted RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 SLC16A2P36021 539 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 STK4Q13043 487 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 PARP10Q53GL7 1025 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 LRRC15Q8TF66 581 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 MXD3Q9BW11 206 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 LDHBP07195 334 aaKnown RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 SNAP25P60880 206 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 SLC7A5Q01650 507 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 TXNRD1Q16881 649 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 GPR161Q8N6U8 529 aaKnown RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 GLIS3Q8NEA6 775 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 GSDMAQ96QA5 445 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 LACRTQ9GZZ8 138 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 ALS2Q96Q42 1657 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 COL18A1P39060 1754 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 C6orf229H3BNL8 230 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 CYTH3O43739 400 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 TAL1P17542 331 aaPredicted RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 TNNI2P48788 182 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 ATP2C1P98194 919 aaPredicted RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 CCDC96Q2M329 555 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 SRGAP1Q7Z6B7 1085 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 CNGA4Q8IV77 575 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 FERMT2Q96AC1 680 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 NGLY1Q96IV0 654 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 NAPGQ99747 312 aaPredicted RBP16.93■□□□□ 0.3
EFNB1-201ENST00000204961 DEF6Q9H4E7 631 aa16.93■□□□□ 0.3
EFNB1-201ENST00000204961 CDC23Q9UJX2 597 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms