RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 IFIH1Q9BYX4 1025 aaKnown RBP12.5□□□□□ -0.41
ACTN1-201ENST00000193403 EHD2Q9NZN4 543 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-201ENST00000193403 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 EXOC5O00471 708 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 OPA1O60313 960 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 USP14P54578 494 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 CASP7P55210 303 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 TUBB4BP68371 445 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 NTRK3Q16288 839 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 EARS2Q5JPH6 523 aaKnown RBP12.5□□□□□ -0.41
ACTN1-201ENST00000193403 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 EPB41L4AQ9HCS5 686 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-201ENST00000193403 FAM169AQ9Y6X4 670 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 SMIM22K7EJ46 135 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 RNF225M0QZC1 329 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-201ENST00000193403 PDE8BO95263 885 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 PRCPP42785 496 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 RASGRF1Q13972 1273 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 TRIM14Q14142 442 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 PUM3Q15397 648 aaKnown RBP12.5□□□□□ -0.41
ACTN1-201ENST00000193403 DTHD1Q6ZMT9 781 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 FERMT2Q96AC1 680 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 NLRC4Q9NPP4 1024 aa12.5□□□□□ -0.41
ACTN1-201ENST00000193403 MOCS3O95396 460 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 BMP15O95972 392 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 KLK7P49862 253 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 HLFQ16534 295 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 KLHL7Q8IXQ5 586 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-201ENST00000193403 PSD3Q9NYI0 1048 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 LIFRP42702 1097 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 VAV2P52735 878 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 DPYDQ12882 1025 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
ACTN1-201ENST00000193403 KCTD19Q17RG1 926 aaPredicted RBP12.49□□□□□ -0.41
ACTN1-201ENST00000193403 DZIP3Q86Y13 1208 aaKnown RBP12.49□□□□□ -0.41
ACTN1-201ENST00000193403 MED15Q96RN5 788 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 SPATA31A3Q5VYP0 1347 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 GOLGB1Q14789 3259 aaKnown RBP12.49□□□□□ -0.41
ACTN1-201ENST00000193403 NCK2O43639 380 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 CTSWP56202 376 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 EFCAB13Q8IY85 973 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 MSANTD4Q8NCY6 345 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 COG1Q8WTW3 980 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 PPANQ9NQ55 473 aaKnown RBP12.49□□□□□ -0.41
ACTN1-201ENST00000193403 AGPAT5Q9NUQ2 364 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 HPCAL4Q9UM19 191 aa12.49□□□□□ -0.41
ACTN1-201ENST00000193403 GOLGA6L7A0A1B0GV03 622 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 KRT18P05783 430 aaKnown RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 NOP2P46087 812 aaKnown RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 AATFQ9NY61 560 aaKnown RBP eCLIP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 NIP7Q9Y221 180 aaKnown RBP eCLIP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 NMT2O60551 498 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 RRAGAQ7L523 313 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 DYMQ7RTS9 669 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 LPIN2Q92539 896 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 RRP36Q96EU6 259 aaKnown RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 SCLT1Q96NL6 688 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 TUBGCP2Q9BSJ2 902 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 A0A087WUV0 522 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 DYNLL1P63167 89 aaKnown RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 ZBTB38Q8NAP3 1195 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 HNRNPLLQ8WVV9 542 aaKnown RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 TAF4BQ92750 862 aa12.48□□□□□ -0.41
ACTN1-201ENST00000193403 NHEJ1Q9H9Q4 299 aaPredicted RBP12.48□□□□□ -0.41
ACTN1-201ENST00000193403 HEG1Q9ULI3 1381 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 PPP1R3GB7ZBB8 358 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 IL2RBP14784 551 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 MAGEA1P43355 309 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 INF2Q27J81 1249 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 NFRKBQ6P4R8 1299 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 CCDC43Q96MW1 224 aaKnown RBP12.47□□□□□ -0.41
ACTN1-201ENST00000193403 ARHGAP23Q9P227 1491 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 SMIM23A6NLE4 172 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 CCDC40Q4G0X9 1142 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 LACRTQ9GZZ8 138 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 AKAP12Q02952 1782 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 GSG1L2A8MUP6 293 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 USP17L21D6R901 530 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 PCCAP05165 728 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-201ENST00000193403 GYG1P46976 350 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 PPFIA1Q13136 1202 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 CT47A1Q5JQC4 288 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-201ENST00000193403 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
ACTN1-201ENST00000193403 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 HPS3Q969F9 1004 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 LRRC1Q9BTT6 524 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 CCDC113Q9H0I3 377 aa12.47□□□□□ -0.41
ACTN1-201ENST00000193403 MYO1AQ9UBC5 1043 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms