RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 PTGDRQ13258 359 aa21.23■□□□□ 0.99
CTSA-201ENST00000191018 SHROOM1Q2M3G4 852 aaPredicted RBP21.23■□□□□ 0.99
CTSA-201ENST00000191018 TMEM179Q6ZVK1 233 aa21.23■□□□□ 0.99
CTSA-201ENST00000191018 RASGRP4Q8TDF6 673 aa21.23■□□□□ 0.99
CTSA-201ENST00000191018 VAT1LQ9HCJ6 419 aa21.23■□□□□ 0.99
CTSA-201ENST00000191018 ZNF70Q9UC06 446 aaPredicted RBP21.23■□□□□ 0.99
CTSA-201ENST00000191018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.22■□□□□ 0.99
CTSA-201ENST00000191018 EEF2P13639 858 aaKnown RBP21.22■□□□□ 0.99
CTSA-201ENST00000191018 SPDYE2Q495Y8 402 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 SIAH1Q8IUQ4 282 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 TAOK3Q9H2K8 898 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 A0A087WWV3 80 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 CCDC194A0A1B0GVG4 234 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 GNA11P29992 359 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 CNNM3Q8NE01 707 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 FAM151AQ8WW52 585 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 CSRNP1Q96S65 589 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 GPCPD1Q9NPB8 672 aa21.22■□□□□ 0.99
CTSA-201ENST00000191018 CNTNAP1P78357 1384 aa21.21■□□□□ 0.99
CTSA-201ENST00000191018 SMCO2A6NFE2 343 aa21.21■□□□□ 0.99
CTSA-201ENST00000191018 NFKBIEO00221 500 aa21.21■□□□□ 0.99
CTSA-201ENST00000191018 FKBP1CQ5VVH2 108 aa21.21■□□□□ 0.99
CTSA-201ENST00000191018 USP49Q70CQ1 688 aa21.21■□□□□ 0.99
CTSA-201ENST00000191018 C4orf32Q8N8J7 132 aa21.21■□□□□ 0.99
CTSA-201ENST00000191018 C6orf50Q9HD87 102 aa21.21■□□□□ 0.99
CTSA-201ENST00000191018 HERC5Q9UII4 1024 aaKnown RBP21.21■□□□□ 0.99
CTSA-201ENST00000191018 CLRN2A0PK11 232 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 TCP10L2B9ZVM9 353 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 POLR2DO15514 142 aaKnown RBP21.2■□□□□ 0.98
CTSA-201ENST00000191018 MDM2Q00987 491 aaPredicted RBP21.2■□□□□ 0.98
CTSA-201ENST00000191018 ATP2B2Q01814 1243 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 SEPT2Q15019 361 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 R3HDM1Q15032 1099 aaKnown RBP21.2■□□□□ 0.98
CTSA-201ENST00000191018 ABCB5Q2M3G0 1257 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 ARL6IP4Q66PJ3 421 aaKnown RBP21.2■□□□□ 0.98
CTSA-201ENST00000191018 CEP57L1Q8IYX8 460 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 MTMR8Q96EF0 704 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 ZBED3Q96IU2 234 aaPredicted RBP21.2■□□□□ 0.98
CTSA-201ENST00000191018 JMJD4Q9H9V9 463 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 CD2APQ9Y5K6 639 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 ESPNB1AK53 854 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 MCM7P33993 719 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 NLRP12P59046 1061 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 TTBK2Q6IQ55 1244 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 ADGRF4Q8IZF3 695 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 BPIFA3Q9BQP9 254 aa21.2■□□□□ 0.98
CTSA-201ENST00000191018 GDF11O95390 407 aa21.19■□□□□ 0.98
CTSA-201ENST00000191018 ICA1Q05084 483 aa21.19■□□□□ 0.98
CTSA-201ENST00000191018 PNOCQ13519 176 aa21.19■□□□□ 0.98
CTSA-201ENST00000191018 DPCR1Q3MIW9 517 aa21.19■□□□□ 0.98
CTSA-201ENST00000191018 CIAPIN1Q6FI81 312 aa21.19■□□□□ 0.98
CTSA-201ENST00000191018 KRT25Q7Z3Z0 450 aa21.19■□□□□ 0.98
CTSA-201ENST00000191018 DHX40Q8IX18 779 aaKnown RBP21.19■□□□□ 0.98
CTSA-201ENST00000191018 DCAF4Q8WV16 495 aa21.19■□□□□ 0.98
CTSA-201ENST00000191018 PNMA6FA0A0J9YX94 578 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 ACTN4O43707 911 aaKnown RBP21.18■□□□□ 0.98
CTSA-201ENST00000191018 JAG1P78504 1218 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 RRP1BQ14684 758 aaKnown RBP21.18■□□□□ 0.98
CTSA-201ENST00000191018 EPSTI1Q96J88 318 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 NAT10Q9H0A0 1025 aaKnown RBP21.18■□□□□ 0.98
CTSA-201ENST00000191018 RRAGDQ9NQL2 400 aaPredicted RBP21.18■□□□□ 0.98
CTSA-201ENST00000191018 CCDC39Q9UFE4 941 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 ZRSR1Q15695 479 aaKnown RBP21.18■□□□□ 0.98
CTSA-201ENST00000191018 IL17AQ16552 155 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 INF2Q27J81 1249 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 CCDC96Q2M329 555 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 RBM26Q5T8P6 1007 aaKnown RBP21.18■□□□□ 0.98
CTSA-201ENST00000191018 PPP1R18Q6NYC8 613 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 GMCL1P1Q8NEA9 526 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 JDP2Q8WYK2 163 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 SYMPKQ92797 1274 aaKnown RBP21.18■□□□□ 0.98
CTSA-201ENST00000191018 SERTAD1Q9UHV2 236 aa21.18■□□□□ 0.98
CTSA-201ENST00000191018 VWA3AA6NCI4 1184 aa21.17■□□□□ 0.98
CTSA-201ENST00000191018 PLCB2Q00722 1185 aa21.17■□□□□ 0.98
CTSA-201ENST00000191018 KCTD1Q719H9 257 aa21.17■□□□□ 0.98
CTSA-201ENST00000191018 FAM83AQ86UY5 434 aa21.17■□□□□ 0.98
CTSA-201ENST00000191018 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.17■□□□□ 0.98
CTSA-201ENST00000191018 HOOK1Q9UJC3 728 aaKnown RBP21.17■□□□□ 0.98
CTSA-201ENST00000191018 LTBP3Q9NS15 1303 aa21.17■□□□□ 0.98
CTSA-201ENST00000191018 A0A087X0B3 334 aa21.16■□□□□ 0.98
CTSA-201ENST00000191018 PPP1R11O60927 126 aaPredicted RBP21.16■□□□□ 0.98
CTSA-201ENST00000191018 GH2P01242 217 aa21.16■□□□□ 0.98
CTSA-201ENST00000191018 SLFN13Q68D06 897 aa21.16■□□□□ 0.98
CTSA-201ENST00000191018 KANK3Q6NY19 840 aa21.16■□□□□ 0.98
CTSA-201ENST00000191018 ZSCAN30Q86W11 494 aa21.16■□□□□ 0.98
CTSA-201ENST00000191018 COA7Q96BR5 231 aa21.16■□□□□ 0.98
CTSA-201ENST00000191018 SYNPO2Q9UMS6 1093 aa21.16■□□□□ 0.98
CTSA-201ENST00000191018 GOLGA6L19H0YKK7 550 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 BIN1O00499 593 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 FOXN1O15353 648 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 SLC16A2P36021 539 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 PTGER2P43116 358 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 MMP14P50281 582 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 POSTNQ15063 836 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 NONOQ15233 471 aaKnown RBP eCLIP21.15■□□□□ 0.98
CTSA-201ENST00000191018 NT5DC1Q5TFE4 455 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 PDILTQ8N807 584 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 PPP1R1BQ9UD71 204 aaPredicted RBP21.15■□□□□ 0.98
CTSA-201ENST00000191018 PCDHA5Q9Y5H7 936 aa21.15■□□□□ 0.98
CTSA-201ENST00000191018 USP17L10C9JJH3 530 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms