RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 GJA10Q969M2 543 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 UTP11Q9Y3A2 253 aaKnown RBP20.84■□□□□ 0.93
MBD3-201ENST00000156825 BCRP11274 1271 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 DNM2P50570 870 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 WDR17Q8IZU2 1322 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 NR5A1Q13285 461 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 DEPTORQ8TB45 409 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 ACTN4O43707 911 aaKnown RBP20.84■□□□□ 0.93
MBD3-201ENST00000156825 SASH1O94885 1247 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 POLR2MP0CAP2 368 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 CCDC105Q8IYK2 499 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 CSRNP2Q9H175 543 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 NKIRAS1Q9NYS0 192 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 RTEL1Q9NZ71 1219 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 BUB1O43683 1085 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 GOLGA8FQ08AF8 430 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 GOLGA8DPQ0D2H9 430 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 ABCB5Q2M3G0 1257 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 PLA2G4DQ86XP0 818 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 GRAMD1CQ8IYS0 662 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 SAMD15Q9P1V8 674 aa20.83■□□□□ 0.93
MBD3-201ENST00000156825 ANKRD35Q8N283 1001 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 OR8K1Q8NGG5 319 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 DYNLL2Q96FJ2 89 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 AIFM3Q96NN9 605 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 PANK4Q9NVE7 773 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 DLATP10515 647 aaKnown RBP20.83■□□□□ 0.92
MBD3-201ENST00000156825 CACNB1Q02641 598 aaPredicted RBP20.83■□□□□ 0.92
MBD3-201ENST00000156825 TNFAIP1Q13829 316 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 FAM47CQ5HY64 1035 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 GADL1Q6ZQY3 521 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 ADAT2Q7Z6V5 191 aaKnown RBP20.83■□□□□ 0.92
MBD3-201ENST00000156825 NLGN1Q8N2Q7 840 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 GPR161Q8N6U8 529 aaKnown RBP20.83■□□□□ 0.92
MBD3-201ENST00000156825 TRPC6Q9Y210 931 aa20.83■□□□□ 0.92
MBD3-201ENST00000156825 XDHP47989 1333 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 LARGE1O95461 756 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 SND1Q7KZF4 910 aaKnown RBP eCLIP20.82■□□□□ 0.92
MBD3-201ENST00000156825 HOOK2Q96ED9 719 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 CSRNP1Q96S65 589 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 RGS12O14924 1447 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 TUBBP07437 444 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 GPR162Q16538 588 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 NSUN7Q8NE18 718 aaKnown RBP20.82■□□□□ 0.92
MBD3-201ENST00000156825 EFCAB6Q5THR3 1501 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 ZNF521Q96K83 1311 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 FAM178BQ8IXR5 827 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 RAB3IL1Q8TBN0 382 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 PLEKHG1Q9ULL1 1385 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 USP17L8P0C7I0 530 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 ZNF853P0CG23 659 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 ARMCX3Q9UH62 379 aaPredicted RBP20.82■□□□□ 0.92
MBD3-201ENST00000156825 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.82■□□□□ 0.92
MBD3-201ENST00000156825 PPANQ9NQ55 473 aaKnown RBP20.82■□□□□ 0.92
MBD3-201ENST00000156825 OGFRQ9NZT2 677 aa20.82■□□□□ 0.92
MBD3-201ENST00000156825 K7ENM7 598 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 CIAO1O76071 339 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 SYNE4Q8N205 404 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 SOS2Q07890 1332 aaPredicted RBP20.81■□□□□ 0.92
MBD3-201ENST00000156825 PPEF1O14829 653 aaPredicted RBP20.81■□□□□ 0.92
MBD3-201ENST00000156825 ADD2P35612 726 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 BSPRYQ5W0U4 402 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 C10orf67Q8IYJ2 551 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 KIAA1024Q9UPX6 916 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 STAT1P42224 750 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 VPS41P49754 854 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 TRIM7Q9C029 511 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 RAD17O75943 681 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 PRPF6O94906 941 aaKnown RBP20.81■□□□□ 0.92
MBD3-201ENST00000156825 RPN1P04843 607 aaKnown RBP20.81■□□□□ 0.92
MBD3-201ENST00000156825 POLR2FP61218 127 aaKnown RBP20.81■□□□□ 0.92
MBD3-201ENST00000156825 CFAP157Q5JU67 520 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 NCAPG2Q86XI2 1143 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 CCPG1Q9ULG6 757 aa20.81■□□□□ 0.92
MBD3-201ENST00000156825 PABPC4Q13310 644 aaKnown RBP eCLIP20.8■□□□□ 0.923e-7■■■□□ 18.4
MBD3-201ENST00000156825 KSR1Q8IVT5 923 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 PPM1EQ8WY54 764 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 NRBP1Q9UHY1 535 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 GEN1Q17RS7 908 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 IFT20Q8IY31 132 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 OSBPL3Q9H4L5 887 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 IFNB1P01574 187 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 ANO3Q9BYT9 981 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 NLRP1Q9C000 1473 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 CDAN1Q8IWY9 1227 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 ZNF335Q9H4Z2 1342 aaPredicted RBP20.8■□□□□ 0.92
MBD3-201ENST00000156825 KDM3AQ9Y4C1 1321 aa20.8■□□□□ 0.92
MBD3-201ENST00000156825 DDAH1O94760 285 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 IGBP1P78318 339 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 GNPTABQ3T906 1256 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 OTUD6AQ7L8S5 288 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 CNKSR1Q969H4 720 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 MRPL11Q9Y3B7 192 aaKnown RBP20.79■□□□□ 0.92
MBD3-201ENST00000156825 PPP2R5CQ13362 524 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 HLFQ16534 295 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 FAM26FQ5R3K3 315 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 USP17L2Q6R6M4 530 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 ZSWIM5Q9P217 1185 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 NDUFAB1O14561 156 aa20.79■□□□□ 0.92
MBD3-201ENST00000156825 LRRC41Q15345 812 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms