RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TMEM60Q9H2L4 133 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 LZTFL1Q9NQ48 299 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 PARP3Q9Y6F1 533 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 KLRF2D3W0D1 207 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 CDK8P49336 464 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 GSTO1P78417 241 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 RRAGBQ5VZM2 374 aa14.86□□□□□ -0.03
CTNS-201ENST00000046640 GYS2P54840 703 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 ST5P78524 1137 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 SPECC1LQ69YQ0 1117 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 IQUBQ8NA54 791 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 SPATA20Q8TB22 786 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 ARGLU1Q9NWB6 273 aaPredicted RBP14.85□□□□□ -0.03
CTNS-201ENST00000046640 SYNRGQ9UMZ2 1314 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 ZSCAN12O43309 604 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 MAPK8IP2Q13387 824 aaPredicted RBP14.85□□□□□ -0.03
CTNS-201ENST00000046640 PCDHA4Q9UN74 947 aa14.85□□□□□ -0.03
CTNS-201ENST00000046640 LDHCP07864 332 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 SH3RF1Q7Z6J0 888 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 PCDHA6Q9UN73 950 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 GDAQ9Y2T3 454 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 PCDHA8Q9Y5H6 950 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 FRMPD2Q68DX3 1309 aaPredicted RBP14.84□□□□□ -0.03
CTNS-201ENST00000046640 PPP1R3GB7ZBB8 358 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 CCP110O43303 1012 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 TADA3O75528 432 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 DDR1Q08345 913 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 DHX8Q14562 1220 aaKnown RBP14.84□□□□□ -0.03
CTNS-201ENST00000046640 GRM4Q14833 912 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 ELOA2Q8IYF1 753 aaPredicted RBP14.84□□□□□ -0.03
CTNS-201ENST00000046640 TC2NQ8N9U0 490 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 TRIML1Q8N9V2 468 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 TBC1D16Q8TBP0 767 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 CEP95Q96GE4 821 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 FAM53CQ9NYF3 392 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 PHLPP2Q6ZVD8 1323 aa14.84□□□□□ -0.03
CTNS-201ENST00000046640 SOWAHDA6NJG2 315 aa14.83□□□□□ -0.03
CTNS-201ENST00000046640 BMP15O95972 392 aa14.83□□□□□ -0.03
CTNS-201ENST00000046640 CALML3P27482 149 aa14.83□□□□□ -0.03
CTNS-201ENST00000046640 TMEM139Q8IV31 216 aa14.83□□□□□ -0.03
CTNS-201ENST00000046640 NEK11Q8NG66 645 aa14.83□□□□□ -0.03
CTNS-201ENST00000046640 CCDC12Q8WUD4 166 aaPredicted RBP14.83□□□□□ -0.03
CTNS-201ENST00000046640 ARHGAP6O43182 974 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 STAT6P42226 847 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 SCNN1DP51172 638 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 NAPAP54920 295 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 E2F4Q16254 413 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 DOK7Q18PE1 504 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 LETM2Q2VYF4 491 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 RBM17Q96I25 401 aaKnown RBP14.83□□□□□ -0.04
CTNS-201ENST00000046640 VPS16Q9H269 839 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 TMEM51Q9NW97 253 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 PUF60Q9UHX1 559 aaKnown RBP14.83□□□□□ -0.04
CTNS-201ENST00000046640 FLT1P17948 1338 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 RAD21O60216 631 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 TFRCP02786 760 aaKnown RBP14.83□□□□□ -0.04
CTNS-201ENST00000046640 PPP2R3AQ06190 1150 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 NR1I3Q14994 352 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 TAF3Q5VWG9 929 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 SPATA1Q5VX52 437 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 PDXDC2PQ6P474 469 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 GSDMAQ96QA5 445 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 UIMC1Q96RL1 719 aa14.83□□□□□ -0.04
CTNS-201ENST00000046640 RGL2O15211 777 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 SASH3O75995 380 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 ERCC5P28715 1186 aaPredicted RBP14.82□□□□□ -0.04
CTNS-201ENST00000046640 PPP4CP60510 307 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 DTHD1Q6ZMT9 781 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 LRRC47Q8N1G4 583 aaKnown RBP14.82□□□□□ -0.04
CTNS-201ENST00000046640 C4orf32Q8N8J7 132 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 USP17L5A8MUK1 530 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 STXBP3O00186 592 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 PES1O00541 588 aaKnown RBP14.82□□□□□ -0.04
CTNS-201ENST00000046640 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 RBL2Q08999 1139 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 JAKMIP3Q5VZ66 844 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 IGSF22Q8N9C0 903 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 PIGSQ96S52 555 aa14.82□□□□□ -0.04
CTNS-201ENST00000046640 MRPL44Q9H9J2 332 aaKnown RBP14.82□□□□□ -0.04
CTNS-201ENST00000046640 BIN2Q9UBW5 565 aaPredicted RBP14.82□□□□□ -0.04
CTNS-201ENST00000046640 TRIM49BA6NDI0 452 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 ATP2B4P23634 1241 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 RHBDL3P58872 404 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 TBX2Q13207 712 aaPredicted RBP14.81□□□□□ -0.04
CTNS-201ENST00000046640 GPR75-ASB3A0A0A6YYF3 556 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 PALM3A6NDB9 673 aaPredicted RBP14.81□□□□□ -0.04
CTNS-201ENST00000046640 CCNT1O60563 726 aaKnown RBP14.81□□□□□ -0.04
CTNS-201ENST00000046640 PARP1P09874 1014 aaKnown RBP14.81□□□□□ -0.04
CTNS-201ENST00000046640 TMEM260Q9NX78 707 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 BARHL2Q9NY43 387 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 TAB2Q9NYJ8 693 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 CCDC88AQ3V6T2 1871 aa14.81□□□□□ -0.04
CTNS-201ENST00000046640 SMCO2A6NFE2 343 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 EFCAB8A8MWE9 144 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 UBA7P41226 1012 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 KCNJ6P48051 423 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 TRAPPC10P48553 1259 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 CRY2Q49AN0 593 aa14.8□□□□□ -0.04
CTNS-201ENST00000046640 APTXQ7Z2E3 356 aaKnown RBP14.8□□□□□ -0.04
CTNS-201ENST00000046640 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms