RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PARP1P09874 1014 aaKnown RBP11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 RCAN1P53805 252 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 DYNLL1P63167 89 aaKnown RBP11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 FUT2Q10981 343 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 E2F4Q16254 413 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 OR8K1Q8NGG5 319 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 CAGE1Q8TC20 777 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 MMS19Q96T76 1030 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 UBR2Q8IWV8 1755 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 RNF40O75150 1001 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 ZNF658Q5TYW1 1059 aaPredicted RBP11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 PDXDC2PQ6P474 469 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 GSPT2Q8IYD1 628 aaKnown RBP11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 RIN2Q8WYP3 895 aaPredicted RBP11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 CCDC172P0C7W6 258 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 VEGFAP15692 232 aaPredicted RBP11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 STAT6P42226 847 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 PPP2R5BQ15173 497 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 IL17AQ16552 155 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 GNL3LQ9NVN8 582 aaKnown RBP11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 SAR1BQ9Y6B6 198 aa11.81□□□□□ -0.52
CX3CL1-201ENST00000006053 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 ADAMTS3O15072 1205 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 NMT2O60551 498 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 TUBBP07437 444 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 CYP19A1P11511 503 aaPredicted RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 USP14P54578 494 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 NPY5RQ15761 445 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 TRAPPC11Q7Z392 1133 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 CTCFLQ8NI51 663 aaPredicted RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 RBM28Q9NW13 759 aaKnown RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 PARP4Q9UKK3 1724 aaKnown RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 SUSD4Q5VX71 490 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 HAUS4Q9H6D7 363 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 CHD4Q14839 1912 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 GUCY2CP25092 1073 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 PMS1P54277 932 aaKnown RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 EIF5P55010 431 aaKnown RBP11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 EVX2Q03828 476 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 TROAPQ12815 778 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 SLC4A8Q2Y0W8 1093 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 WDR93Q6P2C0 686 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 AFAP1L1Q8TED9 768 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 TNFRSF25Q93038 417 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 MED4Q9NPJ6 270 aa11.8□□□□□ -0.52
CX3CL1-201ENST00000006053 GYG1P46976 350 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 HERVK_113P62684 666 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 MAGEC2Q9UBF1 373 aaPredicted RBP11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 JRKLQ9Y4A0 524 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 PP2D1A8MPX8 630 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 H7C1D1 291 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 ZNF185O15231 689 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 MAP9Q49MG5 647 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 FAM182BQ5T319 152 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 IRF2BP1Q8IU81 584 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 MSL3Q8N5Y2 521 aaKnown RBP11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 JAKMIP2Q96AA8 810 aa11.79□□□□□ -0.52
CX3CL1-201ENST00000006053 MACROD2A1Z1Q3 448 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 WTIPA6NIX2 430 aaPredicted RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 B4DLN1 442 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 IPO7O95373 1038 aaKnown RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 TRIM21P19474 475 aaKnown RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 CHRNDQ07001 517 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 JADE2Q9NQC1 790 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 MYH6P13533 1939 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 CNTNAP5Q8WYK1 1306 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 USP17L12C9JPN9 530 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 USP17L21D6R901 530 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 PSMD14O00487 310 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 SYF2O95926 243 aaKnown RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 SCG2P13521 617 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 STIM1Q13586 685 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 DNAJC21Q5F1R6 531 aaKnown RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 WDR59Q6PJI9 974 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 GPIHBP1Q8IV16 184 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 LGALS16A8MUM7 142 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 KRT86O43790 486 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 CALM1P0DP23 149 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 CALM2P0DP24 149 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 CALM3P0DP25 149 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 KLK7P49862 253 aa11.78□□□□□ -0.52
CX3CL1-201ENST00000006053 CYP27A1Q02318 531 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms