RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Gm20425E9Q035 978 aaKnown RBP9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ythdc1E9Q5K9 736 aaKnown RBP9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Bnip3O55003 187 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Gas1Q01721 343 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Muc1Q02496 630 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Esyt2Q3TZZ7 845 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Limch1Q3UH68 1057 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Zbtb45Q52KG4 520 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Phlda1Q62392 405 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Asap2Q7SIG6 958 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Supt20hQ7TT00 530 aaKnown RBP9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Mcph1Q7TT79 822 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 ClmnQ8C5W0 1052 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Vps53Q8CCB4 832 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Adcy3Q8VHH7 1145 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Tm4sf5Q91XF2 196 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Dynll2Q9D0M5 89 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 AtmQ62388 3066 aa9.44□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Wdfy3Q6VNB8 3508 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Klhl34A2AI76 644 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 TroapB7ZNG4 668 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Metap2O08663 478 aaKnown RBP9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Trdmt1O55055 415 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Hsp90b1P08113 802 aaKnown RBP9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Stat3P42227 770 aaKnown RBP9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Rbp3P49194 1234 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Grin2cQ01098 1239 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Gsdma2Q32M21 443 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Pls1Q3V0K9 630 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Tp53i13Q5F267 385 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 NfkbibQ60778 359 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Zfp943Q6NZP4 507 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Zbtb39Q6PDK0 712 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Usp6nlQ80XC3 819 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Dpp8Q80YA7 892 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 1700001K19RikQ80ZT1 219 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Cdkn2aipQ8BI72 563 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Prrg2Q8R182 198 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 FliiQ9JJ28 1271 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Msgn1Q9JK54 188 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Itpr1P11881 2749 aa9.43□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Tnrc18Q80WC3 2878 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Jmjd1cQ69ZK6 2350 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Gm36210A0A1B0GS00 229 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Dnajb6O54946 365 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ier5O89113 308 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Slc4a3P16283 1227 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Aldh1a1P24549 501 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 VrtnQ3SYK4 740 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Cavin2Q63918 418 aaKnown RBP9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ppp4r3aQ6P2K6 820 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Hsdl1Q8BTX9 330 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Agbl2Q8CDK2 862 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 OplahQ8K010 1288 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 BaatQ91X34 420 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 VillQ91YD6 859 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Xpo5Q924C1 1204 aaKnown RBP9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Tomm22Q9CPQ3 142 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 CenpsQ9D084 142 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Eid1Q9DCR4 169 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Efcc1Q9JJF6 558 aa9.42□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Plxna3P70208 1872 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 CntrlA2AL36 2334 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Gm4924A0A1B0GR71 966 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Man1b1A2AJ15 658 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ppp1r9aH3BJD6 1292 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Phka1P18826 1241 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ephb3P54754 993 aaKnown RBP9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 St3gal2Q11204 350 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Nlrp1aQ2LKU9 1182 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Znf865Q3U3I9 1058 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Mrs2Q5NCE8 434 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Crtc1Q68ED7 630 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 NfrkbQ6PIJ4 1296 aaKnown RBP9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Recql4Q75NR7 1216 aaKnown RBP9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Sh3tc2Q80VA5 1289 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ca12Q8CI85 354 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Pcdhac2Q91Y09 1006 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Nkx2-4Q9EQM3 354 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 PalmdQ9JHU2 551 aa9.41□□□□□ -0.9
Scn8a-207ENSMUST00000200959 TnksQ6PFX9 1320 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Gm16427J3QN52 483 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 mt-Co3P00416 261 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Ifnar1P33896 590 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Cwc27Q3TKY6 469 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Prpf38aQ4FK66 312 aaKnown RBP9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 DbnlQ62418 436 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 WaplQ65Z40 1200 aaKnown RBP9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Edrf1Q6GQV7 1239 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Lrfn3Q8BLY3 626 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Dppa3Q8QZY3 150 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Rhobtb2Q91V93 728 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Znf687Q9D2D7 1237 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Foxe3Q9QY14 288 aa9.4□□□□□ -0.9
Scn8a-207ENSMUST00000200959 Col2a1P28481 1487 aa9.4□□□□□ -0.91
Scn8a-207ENSMUST00000200959 Slc6a21A0A1B0GSD2 748 aa9.39□□□□□ -0.91
Scn8a-207ENSMUST00000200959 Tlk2O55047 718 aa9.39□□□□□ -0.91
Scn8a-207ENSMUST00000200959 Lig1P37913 916 aa9.39□□□□□ -0.91
Scn8a-207ENSMUST00000200959 Cxcl12P40224 93 aa9.39□□□□□ -0.91
Scn8a-207ENSMUST00000200959 Ttc9Q3V038 219 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms