RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Q91WD4 421 aa19.51■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Mss51Q9D5Z5 446 aa19.51■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Slc39a2G3X943 309 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Kifc2O08672 792 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Lrrc15Q80X72 579 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Rasgrp4Q8BTM9 673 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Cep95Q8BVV7 827 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ddx54Q8K4L0 874 aaKnown RBP19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 HdlbpQ8VDJ3 1268 aaKnown RBP19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Knop1Q9Z2Q2 478 aaKnown RBP19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Pfkfb3A7UAK5 555 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Gm10378F6XQQ1 160 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Pla2g4aP47713 748 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Tubb4bP68372 445 aaKnown RBP19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Carmil2Q3V3V9 1296 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Slc9a1Q61165 820 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ubxn8Q9QZ49 277 aa19.5■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Tuft1O08970 390 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Psmd14O35593 310 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Stag2O35638 1231 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Parp1P11103 1013 aaKnown RBP19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Klra1P20937 262 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Kifap3P70188 793 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Fam83bQ0VBM2 1012 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Gpbp1Q6NXH3 473 aaKnown RBP19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Zdhhc14Q8BQQ1 489 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Exoc1Q8R3S6 894 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 RarsQ9D0I9 660 aaKnown RBP19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Pex3Q9QXY9 372 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Scgb2b11A0A087WR49 112 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Krt78E9Q0F0 1068 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Gfpt1P47856 697 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ccdc122Q8BVN0 290 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Atp1a1Q8VDN2 1023 aaKnown RBP19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 NsmfQ99NF2 532 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Dnajc7Q9QYI3 494 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ppp2r3dQ9Z176 491 aa19.49■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ube3aO08759 870 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Trip6Q9Z1Y4 480 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ankrd63A2ARS0 390 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Otud7bB2RUR8 840 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Skap2Q3UND0 358 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ccdc38Q8CDN8 563 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Tmem134Q8R0J4 195 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ccdc83Q9D4V3 305 aa19.48■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Kcnh4A2A5F7 1018 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Trim30cD3YVI9 513 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ppef2O35385 757 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Prl2c3P04768 224 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Stim1P70302 685 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Mum1l1Q4VA55 681 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Vmn1r218Q8R261 298 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Adcy3Q8VHH7 1145 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 EhhadhQ9DBM2 718 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Bicdl1A0JNT9 577 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 RaraP11416 462 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Pafah1b1P63005 410 aaKnown RBP19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Sik1Q60670 779 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Arhgef2Q60875 985 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Tekt3Q6X6Z7 490 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Kctd3Q8BFX3 815 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 CutaQ9CQ89 177 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Arpp21Q9DCB4 807 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Hsd3b7Q9EQC1 369 aa19.47■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Zfp853A0A1D5RM95 733 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Trappc10Q3TLI0 1259 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Zc3h12cQ5DTV4 884 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ddx3yQ62095 658 aaKnown RBP19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Sema4bQ62179 823 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Antxr2Q6DFX2 487 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Grin3bQ91ZU9 1003 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Letm1Q9Z2I0 738 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ezh2Q61188 746 aaKnown RBP19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ttll4Q80UG8 1193 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Sdad1Q80UZ2 687 aaKnown RBP19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 MymkQ9D1N4 221 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Ipo7Q9EPL8 1038 aaKnown RBP19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 PfasQ5SUR0 1337 aa19.46■□□□□ 0.71
Ckap4-202ENSMUST00000167671 Pcdh10E9PXQ7 1057 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Exoc5Q3TPX4 708 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Aak1Q3UHJ0 959 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Ppp1r7Q3UM45 361 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Tmtc2Q56A06 836 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Cct8l1Q80YT3 562 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Nfil3O08750 462 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Snx12O70493 165 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Ftl1P29391 183 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Ptpn12P35831 775 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Asic3Q6X1Y6 530 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Kdm1aQ6ZQ88 853 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 EpgnQ924X1 152 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Sh3bp5lQ99LH9 392 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Ccdc96Q9CR92 584 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Prl2c5Q9JLV9 222 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 PappaQ8R4K8 1624 aa19.45■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Herc3A6H6S0 1050 aa19.44■□□□□ 0.7
Ckap4-202ENSMUST00000167671 ErmardE9Q048 622 aa19.44■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Tubb5P99024 444 aaKnown RBP19.44■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Papd7Q6PB75 542 aa19.44■□□□□ 0.7
Ckap4-202ENSMUST00000167671 Dynll2Q9D0M5 89 aa19.44■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms