RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Adarb2Q9JI20 745 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 AmfrQ9R049 643 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 Zmym2Q9CU65 1376 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 Krt78E9Q0F0 1068 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 SarsP26638 512 aaKnown RBP13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 Nap1l2P51860 460 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 Kctd3Q8BFX3 815 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 NapgQ9CWZ7 312 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 Dynll2Q9D0M5 89 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 Lonrf3Q9D4H7 753 aa13.05□□□□□ -0.32
Trim11-202ENSMUST00000108809 Gcom1E9PZ54 550 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Cdr2P97817 455 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 MyzapQ3UIJ9 466 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Cct6bQ61390 531 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Drc7Q6V3W6 876 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Tekt3Q6X6Z7 490 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Epn1Q80VP1 575 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Card14Q99KF0 999 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Pdcd6ipQ9WU78 869 aaKnown RBP13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Psmd10Q9Z2X2 231 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Nup188Q6ZQH8 1759 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Ano3A2AHL1 981 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Igbp1Q61249 340 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Atp1a2Q6PIE5 1020 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Pip5kl1Q6U7H8 395 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Hpcal4Q8BGZ1 191 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Q8C1R3 189 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Sde2Q8K1J5 448 aaKnown RBP13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Scgb2b11A0A087WR49 112 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Gm3409A0A0G2JE67 319 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Tsr1Q5SWD9 803 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Ccp110Q7TSH4 1004 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Fbxo18Q8K2I9 1042 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Alpk1Q9CXB8 1231 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 MymkQ9D1N4 221 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Nr2e3Q9QXZ7 395 aa13.04□□□□□ -0.32
Trim11-202ENSMUST00000108809 Dnm2P39054 870 aaKnown RBP13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Lrrc43Q3V0L5 667 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Map3k11Q80XI6 850 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Spice1Q8C804 860 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Spata4Q8K3V1 295 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Tmem134Q8R0J4 195 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Apopt1Q9CQW7 192 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Plekhg2Q6KAU7 1340 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 TicrrQ8BQ33 1889 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Kif13bA0A286YCV9 1847 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Tmem132bF7BAB2 1078 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Vmn2r71L7N2D8 855 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Nr1i2O54915 431 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Rpusd2Q149F1 553 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 LbrQ3U9G9 626 aaKnown RBP13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Znhit6Q3UFB2 460 aaKnown RBP13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 ItgadQ3V0T4 1168 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 FntaQ61239 377 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Mindy1Q76LS9 468 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Psrc1Q9D0P7 329 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Prl2c5Q9JLV9 222 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Arl6ip4Q9JM93 229 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Mtmr9Q9Z2D0 545 aa13.03□□□□□ -0.32
Trim11-202ENSMUST00000108809 Sec14l1A8Y5H7 715 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Slc39a2G3X943 309 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Kcna1P16388 495 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Pth1rP41593 591 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Tubb4bP68372 445 aaKnown RBP13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Sema4bQ62179 823 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Gpbp1Q6NXH3 473 aaKnown RBP13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Dlg1Q811D0 905 aaKnown RBP13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Srp68Q8BMA6 625 aaKnown RBP13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Ccdc14Q8K2J4 934 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Tktl2Q9D4D4 627 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Eif2ak3Q9Z2B5 1114 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Tmem35bQ3U0Y2 150 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Psg29Q3URN6 468 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Ces3aQ63880 571 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Epc1Q8C9X6 813 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Ces3bQ8VCU1 571 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Uba5Q8VE47 403 aa13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Trub2Q91WG3 331 aaKnown RBP13.02□□□□□ -0.32
Trim11-202ENSMUST00000108809 Psmd14O35593 310 aa13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Parp1P11103 1013 aaKnown RBP13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Msh3P13705 1091 aa13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ano9P86044 747 aa13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Armc2Q3URY6 854 aa13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Pabpc4Q6PHQ9 660 aaKnown RBP13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ccdc122Q8BVN0 290 aa13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Rbm19Q8R3C6 952 aaKnown RBP13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 RarsQ9D0I9 660 aaKnown RBP13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Clstn1Q9EPL2 979 aa13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Pex3Q9QXY9 372 aa13.02□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ddx23D3Z0M9 819 aaKnown RBP13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Gm3893E9Q1I1 302 aa13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Aknad1E9Q8N6 675 aa13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Vsnl1P62761 191 aa13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Arglu1Q3UL36 271 aaKnown RBP13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Cracr2bQ80ZJ8 394 aa13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ttc26Q8BS45 554 aa13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Prc1Q99K43 603 aaKnown RBP13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Ppp1r3gQ9CW07 347 aa13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 Apol7aB2RT54 418 aa13.01□□□□□ -0.33
Trim11-202ENSMUST00000108809 GnaqP21279 359 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms