RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gas1Q01721 343 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Myl6bQ8CI43 207 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Txnrd3Q99MD6 652 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Peak1Q69Z38 1735 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tsc2Q61037 1814 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Myh7bA2AQP0 1941 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ugt1a6bK9J7B2 531 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 CluhQ5SW19 1315 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ugt1a6Q64435 531 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Adck2Q6NSR3 617 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ugt1a7cQ6ZQM8 531 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ttc12Q8BW49 704 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Vstm4T1NXB5 319 aa20.63■□□□□ 0.89
Trim47-202ENSMUST00000106441 Dcdc2bF7BCK0 340 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 NyxP83503 476 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ehmt1Q5DW34 1296 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Usp49Q6P9L4 685 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Phldb2Q8K1N2 1249 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Hexim1Q8R409 356 aaKnown RBP20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Spon1Q8VCC9 807 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Cul4bA2A432 970 aaKnown RBP20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Mageb2A2AHM0 380 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Prss40A6H6T1 365 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Sox5P35710 763 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tbc1d2bQ3U0J8 965 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Plekha7Q3UIL6 1118 aaKnown RBP20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Mum1l1Q4VA55 681 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Lamb3Q61087 1168 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Cyp4x1Q6A152 507 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tas2r124Q7M718 309 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tubb2aQ7TMM9 445 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Larp6Q8BN59 492 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Prpf3Q922U1 683 aaKnown RBP20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tubb2bQ9CWF2 445 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Calml3Q9D6P8 149 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tfcp2Q9ERA0 502 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Atp1a4Q9WV27 1032 aa20.62■□□□□ 0.89
Trim47-202ENSMUST00000106441 Bnip3O55003 187 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Pbx1P41778 430 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 DSCC1Q14AI0 399 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Gtf2f1Q3THK3 508 aaKnown RBP20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ankrd40Q5SUE8 363 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Wdr3Q8BHB4 942 aaKnown RBP20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Efcab8Q8C9R9 203 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ccdc12Q8R344 166 aaKnown RBP20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 SelenooQ9DBC0 667 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tnni2P13412 182 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Eif5P59325 429 aaKnown RBP20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 GscQ02591 256 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Rpusd2Q149F1 553 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ovgp1Q62010 721 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Olfr118Q7TRJ6 321 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Nop9Q8BMC4 636 aaKnown RBP20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Glis2Q8VDL9 521 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Xrcc4Q924T3 326 aa20.61■□□□□ 0.89
Trim47-202ENSMUST00000106441 Btn2a2A4QPC6 514 aa20.6■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tubb4bP68372 445 aaKnown RBP20.6■□□□□ 0.89
Trim47-202ENSMUST00000106441 Clic6Q8BHB9 596 aa20.6■□□□□ 0.89
Trim47-202ENSMUST00000106441 Arhgef6Q8K4I3 771 aa20.6■□□□□ 0.89
Trim47-202ENSMUST00000106441 Smc1aQ9CU62 1233 aaKnown RBP20.6■□□□□ 0.89
Trim47-202ENSMUST00000106441 Desi2Q9D291 194 aa20.6■□□□□ 0.89
Trim47-202ENSMUST00000106441 Itga2bQ9QUM0 1033 aa20.6■□□□□ 0.89
Trim47-202ENSMUST00000106441 Cyp26c1B2RXA7 518 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Phldb3E9QAF4 648 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Pde4aO89084 844 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Calm1P0DP26 149 aaKnown RBP20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Calm2P0DP27 149 aaKnown RBP20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Calm3P0DP28 149 aaKnown RBP20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Fdx1P46656 188 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Emc10Q3TAS6 258 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 BaatQ91X34 420 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Mfap3Q922T2 349 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 GdaQ9R111 454 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Tnip1Q9WUU8 647 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 NinQ61043 2035 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 NrapQ80XB4 1728 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 4932429P05RikA2ADI4 785 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Cap1P40124 474 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Lamc2Q61092 1191 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 HelbQ6NVF4 1074 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Rbm28Q8CGC6 750 aaKnown RBP20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 MlphQ91V27 590 aa20.59■□□□□ 0.89
Trim47-202ENSMUST00000106441 Cacnb3P54285 484 aa20.58■□□□□ 0.89
Trim47-202ENSMUST00000106441 TxlnaQ6PAM1 554 aaKnown RBP20.58■□□□□ 0.89
Trim47-202ENSMUST00000106441 LdhdQ7TNG8 484 aa20.58■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ppfibp1Q8C8U0 969 aaKnown RBP20.58■□□□□ 0.89
Trim47-202ENSMUST00000106441 RabggtaQ9JHK4 567 aa20.58■□□□□ 0.89
Trim47-202ENSMUST00000106441 Ces1aE9PYP1 563 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Rfc1P35601 1131 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Rad23aP54726 363 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Zcwpw1Q6IR42 630 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Cep85Q8BMK0 761 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Kbtbd13Q8C828 458 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Pcdha7Q91Y13 937 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Mfap3lQ9D3X9 409 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 Tob2Q9JM55 345 aa20.58■□□□□ 0.88
Trim47-202ENSMUST00000106441 DnttP09838 530 aa20.57■□□□□ 0.88
Trim47-202ENSMUST00000106441 Mdh1P14152 334 aa20.57■□□□□ 0.88
Trim47-202ENSMUST00000106441 Mmp14P53690 582 aa20.57■□□□□ 0.88
Trim47-202ENSMUST00000106441 Ctr9Q62018 1173 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms