RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Tnni3P48787 211 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Aggf1Q7TN31 711 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Rapgef5Q8C0Q9 814 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ppil4Q9CXG3 492 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cct5P80316 541 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Trim71Q1PSW8 855 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Zbtb16Q3UQ17 673 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Impg2Q80XH2 1243 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cdc23Q8BGZ4 597 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Kif1aP33173 1695 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Gm6588E9Q3K0 461 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Fdx1P46656 188 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ddx31Q6NZQ2 687 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tex9Q9D845 387 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tpx2A2APB8 745 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ttll12Q3UDE2 639 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Khdrbs1Q60749 443 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Gas7Q60780 421 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tmem60Q8K174 133 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cnpy2Q9QXT0 182 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Bag2Q91YN9 210 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Popdc2Q9ES82 367 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Dnmt1P13864 1620 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Trmt10cQ3UFY8 414 aaKnown RBP11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Syne3Q4FZC9 975 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Serpinb1cQ5SV42 375 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Myo6Q64331 1265 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Kif5aP33175 1027 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Abca9Q8K449 1623 aa11.44□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Panx2Q6IMP4 677 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Zfp113Q8C689 439 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Vmn2r68L7N2B3 851 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Fam207aP58468 219 aaKnown RBP11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Slc27a1Q60714 646 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Prc1Q99K43 603 aaKnown RBP11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 DexiQ9WUQ7 95 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Atp6v1aP50516 617 aaKnown RBP11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Myo1gQ5SUA5 1024 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Grtp1Q9D3N8 359 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ptch1Q61115 1434 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Eef1bO70251 225 aaKnown RBP11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Foxp2P58463 714 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Q9DAQ4 598 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Nuak1Q641K5 658 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Wdr44Q6NVE8 915 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 AmphQ7TQF7 686 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 GsdmeQ9Z2D3 512 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Armc2Q3URY6 854 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Akap5D3YVF0 745 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tsr2Q8C8T8 191 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ushbp1Q8R370 680 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tspan17Q9D7W4 270 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cfap70D3YVL2 1141 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tspyl1O88852 379 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Dctpp1Q9QY93 170 aa11.43□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Zbtb40Q6PCS8 1258 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ppp2r5aQ6PD03 486 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Timm10P62073 90 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ccdc160Q3UYG1 323 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Adcy9P51830 1353 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Flot1O08917 428 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Eif4a1P60843 406 aaKnown RBP11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Hspd1P63038 573 aaKnown RBP11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Anapc5Q8BTZ4 740 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Cd209bQ8CJ91 325 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Myo3aQ8K3H5 1613 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 XlrP05531 208 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Ncoa7Q6DFV7 943 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Dnaaf2Q8BPI1 814 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Aox2Q5SGK3 1345 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Mbd5B1AYB6 1498 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Dnajc25A2ALW5 357 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Pls1Q3V0K9 630 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Mylk2Q8VCR8 613 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Tmtc1Q3UV71 942 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Birc2Q62210 612 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Acad11Q80XL6 779 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Kif2cQ922S8 721 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Med10Q9CXU0 135 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 NkapQ9D0F4 415 aaKnown RBP11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 C1qbpO35658 278 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Olfr118Q7TRJ6 321 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Efcab14Q8BGQ6 484 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Kcnk13Q8R1P5 405 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Nlgn1Q99K10 843 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Arhgef10lA2AWP8 1280 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Pcdha4O88689 947 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Glrx3Q9CQM9 337 aa11.42□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Abca17E9PX95 1733 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Syde2E9PUP1 1314 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Trim5E9PV98 497 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Slc10a4Q3UEZ8 437 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Vps41Q5KU39 853 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Bola3Q8CEI1 110 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Spata31d1bE9QA57 1361 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 4933406M09RikG3XA12 479 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Irx1P81068 480 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Eya3P97480 510 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Jarid2Q62315 1234 aa11.41□□□□□ -0.58
Scn8a-201ENSMUST00000082209 Nsmce1Q9D720 266 aa11.41□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms