RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Siah1aP61092 282 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Myo1fP70248 1099 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Surf6P70279 355 aaKnown RBP10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Soga3Q6NZL0 945 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Stambpl1Q76N33 436 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Rassf10Q8BL43 508 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Krt25Q8VCW2 446 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Aipl1Q924K1 328 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ndufb9Q9CQJ8 179 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Sh2b2Q9JID9 621 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Tnip1Q9WUU8 647 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Zfp831A2ADM8 1628 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Trim55G3X8Y1 545 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Epb41l2O70318 988 aaKnown RBP10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 NntQ61941 1086 aaKnown RBP10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Znf280dQ68FE8 974 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ccdc93Q7TQK5 629 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Rdm1Q9CQK3 281 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ddx47Q9CWX9 455 aaKnown RBP10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Cep72Q9D3R3 646 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Copb1Q9JIF7 953 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Tsc2Q61037 1814 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Prl3d2F6R3P9 224 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Cxcr2P35343 359 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Irf6P97431 467 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Ift88Q61371 824 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Mindy1Q76LS9 468 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Fnbp1Q80TY0 616 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Cnot6lQ8VEG6 555 aa10.28□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Foxp1P58462 705 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Kiaa1468Q148V7 1216 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Rec8Q8C5S7 591 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Usp20Q8C6M1 916 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Vcpip1Q8CDG3 1220 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Spata4Q8K3V1 295 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Dhx58Q99J87 678 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Sar1bQ9CQC9 198 aa10.27□□□□□ -0.76
Ccdc171-201ENSMUST00000053414 Bcl9Q9D219 1425 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Metap2O08663 478 aaKnown RBP10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Mettl5Q8K1A0 209 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Mis12Q9CY25 206 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Stard3nlQ9DCI3 235 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Ddx20Q9JJY4 825 aaKnown RBP10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Grik3B1AS29 919 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Fam129cD3YZB0 591 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Top1Q04750 767 aaKnown RBP10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Kiaa0319Q5SZV5 1081 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Spag7Q7TNE3 227 aaKnown RBP10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 WhrnQ80VW5 918 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Zbed4Q80WQ9 1168 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Pcdha12Q91Y18 950 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Tktl2Q9D4D4 627 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Appbp2Q9DAX9 585 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Myo5aQ99104 1853 aaKnown RBP10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Med23Q80YQ2 1367 aa10.27□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Etnk2A7MCT6 385 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Eya2O08575 532 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Prl2c3P04768 224 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Sdc2P43407 202 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Sec23aQ01405 765 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Tmem35bQ3U0Y2 150 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Gnat3Q3V3I2 354 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Gga2Q6P5E6 603 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Smc2Q8CG48 1191 aaKnown RBP10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Rassf8Q8CJ96 419 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Ciao1Q99KN2 339 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Fsip1Q9D3V5 435 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Cnpy3Q9DAU1 276 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Stk39Q9Z1W9 556 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Gm5134E9QAB5 671 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 PrphP15331 475 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Brinp3Q499E0 766 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Fam170aQ66LM6 333 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Ccdc40Q8BI79 1192 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 PreplQ8C167 725 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Arhgef6Q8K4I3 771 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Mex3cQ05A36 652 aaKnown RBP10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Il17raQ60943 864 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Srrm3Q80WV7 648 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Ccdc14Q8K2J4 934 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Klra17Q9JMA4 273 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Shox2P70390 331 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Tax1bp1Q3UKC1 814 aaKnown RBP10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 ErmnQ5EBJ4 281 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 RadxQ8C779 850 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Eps8l1Q8R5F8 716 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Phkg2Q9DB30 406 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Tfcp2Q9ERA0 502 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 GgcxQ9QYC7 757 aa10.26□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Prl2c2P04095 224 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Znhit6Q3UFB2 460 aaKnown RBP10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Tmprss11aQ3UQ41 389 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Mum1l1Q4VA55 681 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Slc30a9Q5IRJ6 567 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Trim52Q8CDV4 233 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Pcdhb22Q91XZ8 794 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Vps16Q920Q4 839 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Lrrc57Q9D1G5 239 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 MymkQ9D1N4 221 aa10.25□□□□□ -0.77
Ccdc171-201ENSMUST00000053414 Krtap5-3Q9D226 196 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms