RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Tph1P17532 447 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Gbp1Q01514 589 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Anp32cQ64G17 123 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Hps6Q8BLY7 805 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Cdk8Q8R3L8 464 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 DgkiD3YWQ0 1071 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Pnpla2Q8BJ56 486 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 CalrP14211 416 aaKnown RBP20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 TxkP42682 527 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Pank4Q80YV4 820 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Haus1Q8BHX1 278 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 CactinQ9CS00 772 aaKnown RBP20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Lonp2Q9DBN5 852 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Nr2e3Q9QXZ7 395 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Ercc6l2Q9JIM3 1537 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Rreb1Q3UH06 1700 aaKnown RBP20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 FosP01101 380 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 LrmpQ60664 539 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Cacna2d2Q6PHS9 1154 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Iws1Q8C1D8 766 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Fbxo3Q9DC63 480 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Akr1b8P45377 316 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Meis1Q60954 390 aa20.25■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Fam196bQ6GQV1 535 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 AsphQ8BSY0 741 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Atp5c1Q91VR2 298 aaKnown RBP20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Kiaa0556Q8C753 1610 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Cul7Q8VE73 1689 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Gm45194A0A140LJG2 572 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Rps6ka1P18653 724 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Lamc2Q61092 1191 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Fxr1Q61584 677 aaKnown RBP20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Rab11fip4Q8BQP8 635 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Ciapin1Q8WTY4 309 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Pstpip2Q99M15 334 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Trip13Q3UA06 432 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Clul1Q3ZRW6 464 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Lrrc41Q8K1C9 807 aa20.24■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Gm3415J3QMS8 315 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Osbpl2Q8BX94 484 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Gm3404Q9D506 307 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Sdr42e1Q9D665 394 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Mroh8E9PYI4 1049 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Pcdha4O88689 947 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Pde1bQ01065 535 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Trim21Q62191 470 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Tbx22Q8K402 517 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 S100bP50114 92 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Sap130Q8BIH0 1057 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Ccdc28aQ8CEI3 192 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Ak9G3UYQ4 1894 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Ccdc157Q5SPX1 718 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Fam228aQ8CDW1 299 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Cnpy3Q9DAU1 276 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Riok3Q9DBU3 519 aaKnown RBP20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Kif5cP28738 956 aaKnown RBP20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Otop3Q80UF9 577 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Sept9Q80UG5 583 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Lmbrd1Q8K0B2 537 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Grpel1Q99LP6 217 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 GdaQ9R111 454 aa20.23■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Gm4297D3YWB7 211 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 P4hbP09103 509 aaKnown RBP20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Slc17a8Q8BFU8 601 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Kif2bQ8C0N1 668 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Usp14Q9JMA1 493 aaKnown RBP20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 DexiQ9WUQ7 95 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Lrrc74aA0A1Y7VMD6 494 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Vti1aO89116 217 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Skiv2lQ6NZR5 1244 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Trak2Q6P9N8 913 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 PigsQ6PD26 555 aaKnown RBP20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Frmpd4A2AFR3 1320 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Apol11aE9PZG0 334 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Hoxa13Q62424 386 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Akap8Q9DBR0 687 aaKnown RBP20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Tacc3Q9JJ11 631 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Speer3W4VSP1 261 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Ahdc1Q6PAL7 1594 aaKnown RBP20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Tsga10Q6NY15 697 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Arhgap10Q6Y5D8 786 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Psma7Q9Z2U0 248 aa20.22■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Alppl2P24823 529 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Slc10a4Q3UEZ8 437 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Arhgap33Q80YF9 1305 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Mtus1Q5HZI1 1210 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Krt40Q6IFX3 439 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Krt77Q6IFZ6 572 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Gpr108Q91WD0 569 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Krt34Q9D646 392 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Senp6Q6P7W0 1132 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Rsph3bQ9DA80 389 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Dip2aQ8BWT5 1523 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Gm4841E9QAA8 417 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Cbfa2t2O70374 594 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Mphosph8Q3TYA6 858 aaKnown RBP20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Ces1Q8VCC2 565 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Rfc4Q99J62 364 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Tnnc2P20801 160 aa20.21■□□□□ 0.83
Scaf11-201ENSMUST00000047835 Usp28Q5I043 1051 aa20.21■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms