RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ctdspl2Q8BG15 465 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Armc6Q8BNU0 468 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Q8K2W9 541 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Utp3Q9JI13 469 aaKnown RBP9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gm5114W4VSN8 858 aa9.94□□□□□ -0.82
Trim39-201ENSMUST00000042717 SynrgQ5SV85 1306 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gm7356A0A087WSA6 508 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gm43738A0A0G2JEA5 862 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gm10134F6ZQC6 126 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Bin1O08539 588 aaKnown RBP9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Dapk3O54784 448 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 OatP29758 439 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Eif5P59325 429 aaKnown RBP9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ttll12Q3UDE2 639 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tfcp2l1Q3UNW5 479 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Usp49Q6P9L4 685 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Dppa3Q8QZY3 150 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 AdpgkQ8VDL4 496 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Snapc2Q91XA5 359 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Krtap5-3Q9D226 196 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Azi2Q9QYP6 405 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Palm3A2TJV2 734 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gna11P21278 359 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Pex1Q5BL07 1284 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Csrnp2Q8BGQ2 534 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Scfd2Q8BTY8 684 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 C8aQ8K182 587 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Oxnad1Q8VE38 311 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ubxn2aQ99KJ0 258 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Krt23Q99PS0 422 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 TbcbQ9D1E6 244 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ddx20Q9JJY4 825 aaKnown RBP9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Nlrp5Q9R1M5 1163 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 NynrinQ5DTZ0 1840 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Slc39a2G3X943 309 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 L1camP11627 1260 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 NogP97466 232 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Snw1Q9CSN1 536 aaKnown RBP9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Styxl1Q9DAR2 321 aa9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Pdcd6ipQ9WU78 869 aaKnown RBP9.93□□□□□ -0.82
Trim39-201ENSMUST00000042717 Atrnl1Q6A051 1378 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tbc1d2B1AVH7 922 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Pls1Q3V0K9 630 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Brd2Q7JJ13 798 aaKnown RBP9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cep120Q7TSG1 988 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ehd2Q8BH64 543 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gga3Q8BMI3 718 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Lrrd1Q8C0R9 853 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Zfp202Q8C879 641 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Phf20l1Q8CCJ9 1013 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Dnttip2Q8R2M2 758 aaKnown RBP9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ces1Q8VCC2 565 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gm43638A0A0J9YU36 694 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tph1P17532 447 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Nap1l2P51860 460 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cyp2e1Q05421 493 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Hoxa13Q62424 386 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Dync1li2Q6PDL0 492 aaKnown RBP9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Galnt17Q7TT15 598 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cep85Q8BMK0 761 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 LRWD1Q8BUI3 648 aaKnown RBP9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Morc2bQ8C5W4 1022 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Washc1Q8VDD8 475 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cdca7Q9D0M2 382 aa9.92□□□□□ -0.82
Trim39-201ENSMUST00000042717 Bcorl1A2AQH4 1781 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tex13cD3YU32 604 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Il13ra2O88786 383 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 PRAG1Q571I4 1179 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tnni3kQ5GIG6 834 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Islr2Q5RKR3 745 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Igf2bp2Q5SF07 592 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Adgrg6Q6F3F9 1165 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tas2r124Q7M718 309 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Clic6Q8BHB9 596 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ccdc150Q8CDI7 1110 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Hexim1Q8R409 356 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Kctd10Q922M3 315 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Krt82Q99M74 516 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cd274Q9EP73 290 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Dusp10Q9ESS0 483 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Akr1c19G3X9Y6 323 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cdh15P33146 784 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Irf6P97431 467 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 DSCC1Q14AI0 399 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Ccdc84Q4VA36 332 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Atp13a3Q5XF89 1219 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cnga2Q62398 664 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Rrp12Q6P5B0 1295 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Fbxo11Q7TPD1 930 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 IqcgQ80W32 419 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Polr2dQ9D7M8 142 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Telo2Q9DC40 840 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Kcnh3Q9WVJ0 1095 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Cfap73J3QPZ5 306 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Parp2O88554 559 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Tyro3P55144 880 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Zhx2Q8C0C0 836 aaKnown RBP9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Gmcl1Q920G9 524 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Slc5a5Q99PN0 618 aa9.91□□□□□ -0.82
Trim39-201ENSMUST00000042717 Chd1lQ9CXF7 900 aa9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms