RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Gm5580A0A0N4SVP8 411 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Prr29B1ARI9 187 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 GalcP54818 684 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Zhx1P70121 873 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Prom2Q3UUY6 835 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Clca4aQ6Q473 924 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Ppp2r2cQ8BG02 447 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Cep95Q8BVV7 827 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Paf1Q8K2T8 535 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Gpr108Q91WD0 569 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 4930548H24RikQ9D496 437 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Lonp2Q9DBN5 852 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Hmgn5Q9JL35 406 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Nek3Q9R0A5 511 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 MarcksP26645 309 aaKnown RBP11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Pbx1P41778 430 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Tmem232Q5K6N0 675 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Smarca1Q6PGB8 1046 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Tmem179Q8BHH9 233 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Sox30Q8CGW4 782 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Pcdha7Q91Y13 937 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 SelenooQ9DBC0 667 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Dctpp1Q9QY93 170 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Clip2Q9Z0H8 1047 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Akr1b1P45376 316 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 AaasP58742 546 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Foxn3Q499D0 457 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Prpf38aQ4FK66 312 aaKnown RBP11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Atp1a2Q6PIE5 1020 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Igdcc3Q8BQC3 813 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Q8CEZ4 452 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Dnaaf4Q8R368 420 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Spns2Q91VM4 549 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Pla2g12bQ99P27 195 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Ano3A2AHL1 981 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Prr7Q3V0I2 269 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Drc7Q6V3W6 876 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Lmbrd1Q8K0B2 537 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Adam1bQ8R534 806 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Zbed3Q9D0L1 228 aa11.29□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Hps5P59438 1126 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Gas1Q01721 343 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Nab2Q61127 525 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Ints4Q8CIM8 964 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Dnajb6O54946 365 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Nsrp1Q5NCR9 542 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Map3k12Q60700 888 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 HibadhQ99L13 335 aaKnown RBP11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Trim11Q99PQ2 467 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Mss51Q9D5Z5 446 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Tbx18Q9EPZ6 613 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Col20a1Q923P0 1320 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Krt78E9Q0F0 1068 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 DnttP09838 530 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Stat3P42227 770 aaKnown RBP11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Cdkl5Q3UTQ8 938 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Ctdp1Q7TSG2 960 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Pde5aQ8CG03 865 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 CluhQ5SW19 1315 aa11.28□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Col5a2Q3U962 1497 aa11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Cdkn1cP49919 348 aa11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Usp5P56399 858 aaKnown RBP11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Lrrc43Q3V0L5 667 aa11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 GypcQ78HU7 95 aa11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Apol10aQ8CCA5 318 aa11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Trp53inp1Q9QXE4 239 aa11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 Mtmr9Q9Z2D0 545 aa11.27□□□□□ -0.6
Rnft1-201ENSMUST00000020827 MsnP26041 577 aaKnown RBP11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Eya3P97480 510 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Psd3Q2PFD7 1037 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Gpt2Q8BGT5 522 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Mettl5Q8K1A0 209 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Klhl10Q9D5V2 608 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Slfn1Q9Z0I7 337 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Sycp2lA0A0M3U1B0 842 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 MyrflQ3UN70 904 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ehmt1Q5DW34 1296 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 EregQ61521 162 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Olfr805Q8VFI4 319 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Snapc4Q8BP86 1333 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Gnat2P50149 354 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 ErmnQ5EBJ4 281 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Cnnm4Q69ZF7 771 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Dpp8Q80YA7 892 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 MtrrQ8C1A3 696 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ppp1r3aQ99MR9 1089 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Trmt112Q9DCG9 125 aa11.27□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Cspp1B2RX88 1205 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Eef2P58252 858 aaKnown RBP11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Mcm6P97311 821 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Rtel1Q0VGM9 1203 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 RragbQ6NTA4 374 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ankrd13dQ6PD24 605 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 LpxnQ99N69 386 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 NynrinQ5DTZ0 1840 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Guca2bO09051 106 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Tnni3kQ5GIG6 834 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Tbc1d23Q8K0F1 684 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ulk4Q3V129 1303 aa11.26□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Cct6aP80317 531 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms