RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C CCT7P42943 550 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C MNN11P46985 422 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C NOP9P47077 666 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C LGE1Q02796 332 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C ENT5Q03769 411 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C ACL4Q03771 387 aa2.16□□□□□ -2.06
UFD4YKL010C TIF35Q04067 274 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C NHX1Q04121 633 aa2.16□□□□□ -2.06
UFD4YKL010C RCL1Q08096 367 aaPredicted RBP2.16□□□□□ -2.06
UFD4YKL010C YPR202WQ08993 238 aa2.16□□□□□ -2.06
UFD4YKL010C MSB2P32334 1306 aa2.16□□□□□ -2.06
UFD4YKL010C CAR1P00812 333 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C HAP2P06774 265 aa2.16□□□□□ -2.06
UFD4YKL010C KSS1P14681 368 aa2.16□□□□□ -2.06
UFD4YKL010C AAD3P25612 363 aa2.16□□□□□ -2.06
UFD4YKL010C FMP23P38231 175 aa2.16□□□□□ -2.06
UFD4YKL010C NMD3P38861 518 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C YHR182WP38870 785 aa2.16□□□□□ -2.06
UFD4YKL010C FAA2P39518 744 aa2.16□□□□□ -2.06
UFD4YKL010C MEF2P39677 819 aa2.16□□□□□ -2.06
UFD4YKL010C IMA5P40884 581 aa2.16□□□□□ -2.06
UFD4YKL010C YFL012WP43580 148 aa2.16□□□□□ -2.06
UFD4YKL010C SKP1P52286 194 aa2.16□□□□□ -2.06
UFD4YKL010C ALG11P53954 548 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C MUK1Q02866 612 aa2.16□□□□□ -2.06
UFD4YKL010C ECM11Q04110 302 aa2.16□□□□□ -2.06
UFD4YKL010C HSP31Q04432 237 aa2.16□□□□□ -2.06
UFD4YKL010C YDR109CQ04585 715 aa2.16□□□□□ -2.06
UFD4YKL010C YDR124WQ04608 324 aa2.16□□□□□ -2.06
UFD4YKL010C ECM22Q05958 814 aaPredicted RBP2.16□□□□□ -2.06
UFD4YKL010C CDD1Q06549 142 aa2.16□□□□□ -2.06
UFD4YKL010C GPB1Q08886 897 aa2.16□□□□□ -2.06
UFD4YKL010C MSS18P08593 268 aa2.16□□□□□ -2.06
UFD4YKL010C TOP3P13099 656 aa2.16□□□□□ -2.06
UFD4YKL010C HSC82P15108 705 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C YCR090CP25654 182 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C FUB1P25659 250 aa2.16□□□□□ -2.06
UFD4YKL010C DPH5P32469 300 aaPredicted RBP2.16□□□□□ -2.06
UFD4YKL010C PEX2P32800 271 aa2.16□□□□□ -2.06
UFD4YKL010C WHI3P34761 661 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C THI80P35202 319 aa2.16□□□□□ -2.06
UFD4YKL010C PHO89P38361 574 aa2.16□□□□□ -2.06
UFD4YKL010C SRP72P38688 640 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C ETP1P38748 585 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C RPH1P39956 796 aa2.16□□□□□ -2.06
UFD4YKL010C FIR1P40020 876 aa2.16□□□□□ -2.06
UFD4YKL010C ARB1P40024 610 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C RCN2Q12044 265 aa2.16□□□□□ -2.06
UFD4YKL010C JLP1Q12358 412 aa2.16□□□□□ -2.06
UFD4YKL010C STB3Q12427 513 aa2.16□□□□□ -2.06
UFD4YKL010C AHA1Q12449 350 aaKnown RBP2.16□□□□□ -2.06
UFD4YKL010C TSC13Q99190 310 aa2.16□□□□□ -2.06
UFD4YKL010C HEM1P09950 548 aaPredicted RBP2.15□□□□□ -2.06
UFD4YKL010C RPL4AP10664 362 aaKnown RBP2.15□□□□□ -2.06
UFD4YKL010C RRN3P36070 627 aa2.15□□□□□ -2.06
UFD4YKL010C AGP2P38090 596 aa2.15□□□□□ -2.06
UFD4YKL010C YBR071WP38243 211 aa2.15□□□□□ -2.06
UFD4YKL010C YHR045WP38775 560 aa2.15□□□□□ -2.06
UFD4YKL010C EDC3P39998 551 aaKnown RBP2.15□□□□□ -2.06
UFD4YKL010C STB2P46679 850 aa2.15□□□□□ -2.06
UFD4YKL010C RPL4BP49626 362 aaKnown RBP2.15□□□□□ -2.06
UFD4YKL010C PSP2P50109 593 aaKnown RBP2.15□□□□□ -2.06
UFD4YKL010C RMR1P53060 241 aa2.15□□□□□ -2.06
UFD4YKL010C ARO8P53090 500 aaKnown RBP2.15□□□□□ -2.06
UFD4YKL010C GET1P53192 235 aa2.15□□□□□ -2.06
UFD4YKL010C ERP6P53198 216 aa2.15□□□□□ -2.06
UFD4YKL010C YNL165WP53891 406 aa2.15□□□□□ -2.06
UFD4YKL010C SDH1Q00711 640 aa2.15□□□□□ -2.06
UFD4YKL010C VHS1Q03785 461 aa2.15□□□□□ -2.06
UFD4YKL010C YMR160WQ03823 816 aa2.15□□□□□ -2.06
UFD4YKL010C YDR132CQ03900 495 aa2.15□□□□□ -2.06
UFD4YKL010C SMP3Q04174 516 aa2.15□□□□□ -2.06
UFD4YKL010C ECM38Q05902 660 aaPredicted RBP2.15□□□□□ -2.06
UFD4YKL010C YLR225CQ05948 407 aaKnown RBP2.15□□□□□ -2.06
UFD4YKL010C TRX2P22803 104 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C VMA6P32366 345 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C VPH1P32563 840 aaKnown RBP2.15□□□□□ -2.07
UFD4YKL010C TKL2P33315 681 aa2.15□□□□□ -2.07
UFD4YKL010C DUR3P33413 735 aa2.15□□□□□ -2.07
UFD4YKL010C UTP11P34247 250 aaPredicted RBP2.15□□□□□ -2.07
UFD4YKL010C LHS1P36016 881 aa2.15□□□□□ -2.07
UFD4YKL010C ALY1P36117 915 aa2.15□□□□□ -2.07
UFD4YKL010C ECM10P39987 644 aa2.15□□□□□ -2.07
UFD4YKL010C AYR1P40471 297 aa2.15□□□□□ -2.07
UFD4YKL010C YRB2P40517 327 aa2.15□□□□□ -2.07
UFD4YKL010C LAM5P43560 674 aa2.15□□□□□ -2.07
UFD4YKL010C STB4P50104 949 aa2.15□□□□□ -2.07
UFD4YKL010C YML131WQ03102 365 aa2.15□□□□□ -2.07
UFD4YKL010C PIR3Q03180 325 aa2.15□□□□□ -2.07
UFD4YKL010C HRD3Q05787 833 aa2.15□□□□□ -2.07
UFD4YKL010C ATG17Q06410 417 aa2.15□□□□□ -2.07
UFD4YKL010C ASA1Q06822 443 aa2.15□□□□□ -2.07
UFD4YKL010C SHS1Q07657 551 aa2.15□□□□□ -2.07
UFD4YKL010C NSE1Q07913 336 aa2.15□□□□□ -2.07
UFD4YKL010C MET7Q08645 548 aa2.15□□□□□ -2.07
UFD4YKL010C VIK1Q12045 647 aa2.15□□□□□ -2.07
UFD4YKL010C YOR342CQ12182 319 aa2.15□□□□□ -2.07
UFD4YKL010C ZPS1Q12512 249 aa2.15□□□□□ -2.07
UFD4YKL010C RIB3Q99258 208 aa2.15□□□□□ -2.07
UFD4YKL010C ATP1P07251 545 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms