RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIM1	YIL123W	MRH1	Q12117	320 aa	Predicted RBP	11.2	□□□□□ -0.62
SIM1	YIL123W	ATG34	Q12292	412 aa		11.2	□□□□□ -0.62
SIM1	YIL123W	HEM2	P05373	342 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	ALG8	P40351	577 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	COA1	P40452	197 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	IAH1	P41734	238 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	TES1	P41903	349 aa	Known RBP	11.19	□□□□□ -0.62
SIM1	YIL123W	NMA2	P53204	395 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	COG2	P53271	262 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	YNL010W	P53981	241 aa	Known RBP	11.19	□□□□□ -0.62
SIM1	YIL123W	HEL2	Q05580	639 aa	Known RBP	11.19	□□□□□ -0.62
SIM1	YIL123W	BCP1	Q06338	283 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	YDL121C	Q07541	149 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	HRK1	Q08732	759 aa	Known RBP	11.19	□□□□□ -0.62
SIM1	YIL123W	VPS13	Q07878	3144 aa		11.19	□□□□□ -0.62
SIM1	YIL123W	SEC53	P07283	254 aa	Known RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	PHO3	P24031	467 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	GEX1	P25596	615 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	GEX2	P36173	615 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	RIM11	P38615	370 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	YIR007W	P40566	764 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	AIM14	P53109	570 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	NOP19	P53317	196 aa	Predicted RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	YNL034W	P53963	612 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	YNL018C	P53976	612 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	ATP25	Q03153	612 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	HSH49	Q99181	213 aa	Predicted RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	PDC5	P16467	563 aa	Known RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	ARF2	P19146	181 aa	Known RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	DAL81	P21657	970 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	PEX34	P25584	144 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	TYE7	P33122	291 aa	Predicted RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	SKT5	P34226	696 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	SCD5	P34758	872 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	HES1	P35843	434 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	GTS1	P40956	396 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	YJR142W	P47173	342 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	PRO2	P54885	456 aa	Known RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	REX2	P54964	269 aa	Known RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	HOT1	Q03213	719 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	HMO1	Q03973	246 aa	Known RBP	11.18	□□□□□ -0.62
SIM1	YIL123W	MCH5	Q08777	521 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	ICT1	Q12385	394 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	FRT1	Q99332	602 aa		11.18	□□□□□ -0.62
SIM1	YIL123W	RPL24A	P04449	155 aa	Known RBP	11.17	□□□□□ -0.62
SIM1	YIL123W	ART10	P18634	518 aa	Known RBP	11.17	□□□□□ -0.62
SIM1	YIL123W	PTH2	P34222	208 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	SCS2	P40075	244 aa	Known RBP	11.17	□□□□□ -0.62
SIM1	YIL123W	CSN12	P47130	423 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	GTR2	P53290	341 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	COS6	P53344	381 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	ORC3	P54790	616 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	PIR1	Q03178	341 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	GAS3	Q03655	524 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	SEG1	Q04279	960 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	RCO1	Q04779	684 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	LCB5	Q06147	687 aa	Known RBP	11.17	□□□□□ -0.62
SIM1	YIL123W	ESA1	Q08649	445 aa		11.17	□□□□□ -0.62
SIM1	YIL123W	VPS34	P22543	875 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	LIP5	P32875	414 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	PHO11	P35842	467 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	STB6	P36085	766 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	PHO12	P38693	467 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	PAN6	P40459	309 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	MAM33	P40513	266 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	YIL001W	P40560	513 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	VMA13	P41807	478 aa	Known RBP	11.16	□□□□□ -0.62
SIM1	YIL123W	DIM1	P41819	318 aa	Known RBP	11.16	□□□□□ -0.62
SIM1	YIL123W	SUM1	P46676	1062 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	SET2	P46995	733 aa	Known RBP	11.16	□□□□□ -0.62
SIM1	YIL123W	EFM5	P53200	248 aa	Known RBP	11.16	□□□□□ -0.62
SIM1	YIL123W	IBD2	P53892	351 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	YNL143C	P53908	130 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	GOT1	Q03554	138 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	TAF12	Q03761	539 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	YPR114W	Q06107	315 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	YEH2	Q07950	538 aa		11.16	□□□□□ -0.62
SIM1	YIL123W	AHA1	Q12449	350 aa	Known RBP	11.16	□□□□□ -0.62
SIM1	YIL123W	CMR1	Q12510	522 aa	Known RBP	11.16	□□□□□ -0.62
SIM1	YIL123W	SBP1	P10080	294 aa	Known RBP	11.15	□□□□□ -0.62
SIM1	YIL123W	PMA2	P19657	947 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	SAN1	P22470	610 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	MNE1	P24720	663 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	MEF1	P25039	761 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	BUD14	P27637	709 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	LRG1	P35688	1017 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	YBR259W	P38338	688 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	HEM14	P40012	539 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	RIO2	P40160	425 aa	Known RBP	11.15	□□□□□ -0.62
SIM1	YIL123W	IME4	P41833	600 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	LSB6	P42951	607 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	AIM23	P47015	356 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	CLD1	P53264	445 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	YML131W	Q03102	365 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	CDA1	Q06702	301 aa		11.15	□□□□□ -0.62
SIM1	YIL123W	ATP2	P00830	511 aa	Known RBP	11.14	□□□□□ -0.63
SIM1	YIL123W	SPS1	P08458	490 aa		11.14	□□□□□ -0.63
SIM1	YIL123W	REV1	P12689	985 aa		11.14	□□□□□ -0.63
SIM1	YIL123W	DBR1	P24309	405 aa	Known RBP	11.14	□□□□□ -0.63
SIM1	YIL123W	PHO87	P25360	923 aa		11.14	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 133.3 ms