RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 PEP7P32609 515 aa8.66□□□□□ -1.02
LSR1LSR1 PEX6P33760 1030 aa8.66□□□□□ -1.02
LSR1LSR1 YBL029WP38201 376 aa8.66□□□□□ -1.02
LSR1LSR1 IST2P38250 946 aa8.66□□□□□ -1.02
LSR1LSR1 SIF2P38262 535 aa8.66□□□□□ -1.02
LSR1LSR1 HAT2P39984 401 aa8.66□□□□□ -1.02
LSR1LSR1 DIA3P52290 468 aa8.66□□□□□ -1.02
LSR1LSR1 STR3P53101 465 aaKnown RBP8.66□□□□□ -1.02
LSR1LSR1 TIM13P53299 105 aa8.66□□□□□ -1.02
LSR1LSR1 YNL033WP53964 284 aa8.66□□□□□ -1.02
LSR1LSR1 YNL019CP53975 284 aa8.66□□□□□ -1.02
LSR1LSR1 TFB3Q03290 321 aa8.66□□□□□ -1.02
LSR1LSR1 RAD30Q04049 632 aa8.66□□□□□ -1.02
LSR1LSR1 SMP3Q04174 516 aa8.66□□□□□ -1.02
LSR1LSR1 MUM3Q08750 479 aa8.66□□□□□ -1.02
LSR1LSR1 IOC2Q12072 812 aa8.66□□□□□ -1.02
LSR1LSR1 DBP10Q12389 995 aaKnown RBP8.66□□□□□ -1.02
LSR1LSR1 COR1P07256 457 aa8.65□□□□□ -1.02
LSR1LSR1 MSS18P08593 268 aa8.65□□□□□ -1.02
LSR1LSR1 PHO81P17442 1178 aa8.65□□□□□ -1.02
LSR1LSR1 CLN1P20437 546 aa8.65□□□□□ -1.02
LSR1LSR1 CCA1P21269 546 aa8.65□□□□□ -1.02
LSR1LSR1 PHO87P25360 923 aa8.65□□□□□ -1.02
LSR1LSR1 SPB1P25582 841 aaPredicted RBP8.65□□□□□ -1.02
LSR1LSR1 RPS5P26783 225 aaKnown RBP8.65□□□□□ -1.02
LSR1LSR1 PEP12P32854 288 aa8.65□□□□□ -1.02
LSR1LSR1 PTM1P32857 523 aa8.65□□□□□ -1.02
LSR1LSR1 SKG1P36169 355 aa8.65□□□□□ -1.02
LSR1LSR1 YBR056WP38081 501 aa8.65□□□□□ -1.02
LSR1LSR1 EXO84P38261 753 aa8.65□□□□□ -1.02
LSR1LSR1 FTH1P38310 465 aa8.65□□□□□ -1.02
LSR1LSR1 TDP1P38319 544 aa8.65□□□□□ -1.02
LSR1LSR1 MSC7P38694 644 aa8.65□□□□□ -1.02
LSR1LSR1 CYC2P38909 366 aa8.65□□□□□ -1.02
LSR1LSR1 AFG3P39925 761 aa8.65□□□□□ -1.02
LSR1LSR1 ALD5P40047 520 aaKnown RBP8.65□□□□□ -1.02
LSR1LSR1 AGP3P43548 558 aa8.65□□□□□ -1.02
LSR1LSR1 GPI1P53306 609 aa8.65□□□□□ -1.02
LSR1LSR1 ECM9Q02202 377 aa8.65□□□□□ -1.02
LSR1LSR1 YKR005CQ02203 525 aa8.65□□□□□ -1.02
LSR1LSR1 SPP2Q02521 185 aa8.65□□□□□ -1.02
LSR1LSR1 NUP100Q02629 959 aa8.65□□□□□ -1.02
LSR1LSR1 YMR226CQ05016 267 aaKnown RBP8.65□□□□□ -1.02
LSR1LSR1 ORM2Q06144 216 aa8.65□□□□□ -1.02
LSR1LSR1 CRN1Q06440 651 aa8.65□□□□□ -1.02
LSR1LSR1 PMT7Q06644 662 aa8.65□□□□□ -1.02
LSR1LSR1 SAM3Q08986 587 aa8.65□□□□□ -1.02
LSR1LSR1 NTO1Q12311 748 aa8.65□□□□□ -1.02
LSR1LSR1 PSY3Q12318 242 aa8.65□□□□□ -1.02
LSR1LSR1 TRP3P00937 484 aa8.64□□□□□ -1.03
LSR1LSR1 TPK2P06245 380 aa8.64□□□□□ -1.03
LSR1LSR1 HAP2P06774 265 aa8.64□□□□□ -1.03
LSR1LSR1 HSF1P10961 833 aa8.64□□□□□ -1.03
LSR1LSR1 ABF1P14164 731 aa8.64□□□□□ -1.03
LSR1LSR1 NSP1P14907 823 aaKnown RBP8.64□□□□□ -1.03
LSR1LSR1 URE2P23202 354 aaKnown RBP8.64□□□□□ -1.03
LSR1LSR1 PAT1P25644 796 aaKnown RBP8.64□□□□□ -1.03
LSR1LSR1 BUB2P26448 306 aaPredicted RBP8.64□□□□□ -1.03
LSR1LSR1 PTP2P29461 750 aa8.64□□□□□ -1.03
LSR1LSR1 RPC82P32349 654 aa8.64□□□□□ -1.03
LSR1LSR1 MET4P32389 672 aa8.64□□□□□ -1.03
LSR1LSR1 UTP11P34247 250 aaPredicted RBP8.64□□□□□ -1.03
LSR1LSR1 MDJ1P35191 511 aa8.64□□□□□ -1.03
LSR1LSR1 FRE2P36033 711 aa8.64□□□□□ -1.03
LSR1LSR1 SRL3P36167 246 aa8.64□□□□□ -1.03
LSR1LSR1 YBR285WP38354 144 aa8.64□□□□□ -1.03
LSR1LSR1 DSS1P39112 969 aa8.64□□□□□ -1.03
LSR1LSR1 FAA2P39518 744 aa8.64□□□□□ -1.03
LSR1LSR1 YEN1P40028 759 aa8.64□□□□□ -1.03
LSR1LSR1 IMA5P40884 581 aa8.64□□□□□ -1.03
LSR1LSR1 EMC2P47133 292 aaKnown RBP8.64□□□□□ -1.03
LSR1LSR1 MRX6P48564 524 aa8.64□□□□□ -1.03
LSR1LSR1 PEX21P50091 288 aa8.64□□□□□ -1.03
LSR1LSR1 RMR1P53060 241 aa8.64□□□□□ -1.03
LSR1LSR1 CDC14Q00684 551 aa8.64□□□□□ -1.03
LSR1LSR1 PET117Q02771 107 aa8.64□□□□□ -1.03
LSR1LSR1 ECM22Q05958 814 aaPredicted RBP8.64□□□□□ -1.03
LSR1LSR1 BLS1Q06071 122 aa8.64□□□□□ -1.03
LSR1LSR1 GMC2Q06201 188 aa8.64□□□□□ -1.03
LSR1LSR1 YOL159CQ08300 171 aa8.64□□□□□ -1.03
LSR1LSR1 MRH1Q12117 320 aaPredicted RBP8.64□□□□□ -1.03
LSR1LSR1 PKH2Q12236 1081 aaKnown RBP8.64□□□□□ -1.03
LSR1LSR1 YLR149CQ99296 730 aa8.64□□□□□ -1.03
LSR1LSR1 SUC2P00724 532 aa8.63□□□□□ -1.03
LSR1LSR1 MIS1P09440 975 aaKnown RBP8.63□□□□□ -1.03
LSR1LSR1 PMA2P19657 947 aa8.63□□□□□ -1.03
LSR1LSR1 SSA4P22202 642 aaKnown RBP8.63□□□□□ -1.03
LSR1LSR1 PHO3P24031 467 aa8.63□□□□□ -1.03
LSR1LSR1 NGG1P32494 702 aa8.63□□□□□ -1.03
LSR1LSR1 ROT2P38138 954 aa8.63□□□□□ -1.03
LSR1LSR1 YBR241CP38142 488 aa8.63□□□□□ -1.03
LSR1LSR1 STB5P38699 743 aa8.63□□□□□ -1.03
LSR1LSR1 SFB3P38810 929 aa8.63□□□□□ -1.03
LSR1LSR1 SLX8P40072 274 aa8.63□□□□□ -1.03
LSR1LSR1 ESL1P40456 1118 aa8.63□□□□□ -1.03
LSR1LSR1 GCD14P46959 383 aaPredicted RBP8.63□□□□□ -1.03
LSR1LSR1 RTT101P47050 842 aa8.63□□□□□ -1.03
LSR1LSR1 YJR107WP47145 328 aa8.63□□□□□ -1.03
LSR1LSR1 BOL2P53082 120 aa8.63□□□□□ -1.03
LSR1LSR1 YGR054WP53235 642 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms