RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PKNOX2Q96KN3 472 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 ZHX1Q9UKY1 873 aaPredicted RBP19.57■□□□□ 0.72
SCARB2-223ENST00000640640 A0A087WWV3 80 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 KCNJ18B7U540 433 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 KCNJ12Q14500 433 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 SPATA1Q5VX52 437 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 MAEAQ7L5Y9 396 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 C2CD5Q86YS7 1000 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 TIGD1Q96MW7 591 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 QTRT2Q9H974 415 aaKnown RBP19.57■□□□□ 0.72
SCARB2-223ENST00000640640 CLEC11AQ9Y240 323 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 ADAMTS13Q76LX8 1427 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 SOS2Q07890 1332 aaPredicted RBP19.57■□□□□ 0.72
SCARB2-223ENST00000640640 MYCT1Q8N699 235 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 OR8K1Q8NGG5 319 aa19.57■□□□□ 0.72
SCARB2-223ENST00000640640 EEF2P13639 858 aaKnown RBP19.56■□□□□ 0.72
SCARB2-223ENST00000640640 ICA1Q05084 483 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 MORC3Q14149 939 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 GPIHBP1Q8IV16 184 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 GJC1P36383 396 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 CCDC51Q96ER9 411 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 GCNT3O95395 438 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 CYP19A1P11511 503 aaPredicted RBP19.56■□□□□ 0.72
SCARB2-223ENST00000640640 TRIM28Q13263 835 aaKnown RBP19.56■□□□□ 0.72
SCARB2-223ENST00000640640 SECISBP2LQ93073 1101 aaKnown RBP19.56■□□□□ 0.72
SCARB2-223ENST00000640640 GSDMAQ96QA5 445 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 HOMER2Q9NSB8 354 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 H7C1D1 291 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 BIRC3Q13489 604 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 DIXDC1Q155Q3 683 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 C11orf57Q6ZUT1 292 aaPredicted RBP19.56■□□□□ 0.72
SCARB2-223ENST00000640640 CCDC91Q7Z6B0 441 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 TMEM87AQ8NBN3 555 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 MRPL44Q9H9J2 332 aaKnown RBP19.56■□□□□ 0.72
SCARB2-223ENST00000640640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.56■□□□□ 0.72
SCARB2-223ENST00000640640 CDHR2Q9BYE9 1310 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 KDM3AQ9Y4C1 1321 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 PIK3C2BO00750 1634 aa19.56■□□□□ 0.72
SCARB2-223ENST00000640640 KIAA1210Q9ULL0 1709 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 NRXN1Q9ULB1 1477 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 FNBP1Q96RU3 617 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 OGFRQ9NZT2 677 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 TRIM37O94972 964 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 ASIC2Q16515 512 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 RASGRP4Q8TDF6 673 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 TMOD4Q9NZQ9 345 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 ATP6V0A2Q9Y487 856 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 CNKSR1Q969H4 720 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 NLRC4Q9NPP4 1024 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 NRBP1Q9UHY1 535 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 USP17L8P0C7I0 530 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 TNFAIP3P21580 790 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 RABL6Q3YEC7 729 aaPredicted RBP19.55■□□□□ 0.72
SCARB2-223ENST00000640640 SLFN13Q68D06 897 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 DHX37Q8IY37 1157 aaKnown RBP19.55■□□□□ 0.72
SCARB2-223ENST00000640640 CCDC17Q96LX7 622 aa19.55■□□□□ 0.72
SCARB2-223ENST00000640640 EXOC3O60645 756 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 MECOMQ03112 1051 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 PRR16Q569H4 304 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 IQGAP1P46940 1657 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 AGLP35573 1532 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 RPN1P04843 607 aaKnown RBP19.54■□□□□ 0.72
SCARB2-223ENST00000640640 HDXQ7Z353 690 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 TPH2Q8IWU9 490 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 MYOCDQ8IZQ8 938 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 DESI2Q9BSY9 194 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 PCDHA1Q9Y5I3 950 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 GAS7O60861 476 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 CAPN2P17655 700 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 DNM2P50570 870 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 NOX5Q96PH1 765 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 POLR1AO95602 1720 aaPredicted RBP19.54■□□□□ 0.72
SCARB2-223ENST00000640640 IQSEC2Q5JU85 1478 aa19.54■□□□□ 0.72
SCARB2-223ENST00000640640 DKC1O60832 514 aaKnown RBP eCLIP19.53■□□□□ 0.72
SCARB2-223ENST00000640640 ETF1P62495 437 aaKnown RBP19.53■□□□□ 0.72
SCARB2-223ENST00000640640 KLHL30Q0D2K2 578 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 MCTP2Q6DN12 878 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 TMC4Q7Z404 712 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 GJB4Q9NTQ9 266 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 PPEF1O14829 653 aaPredicted RBP19.53■□□□□ 0.72
SCARB2-223ENST00000640640 ZBED4O75132 1171 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 HARSP12081 509 aaKnown RBP19.53■□□□□ 0.72
SCARB2-223ENST00000640640 FOXO4P98177 505 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 PLCB3Q01970 1234 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 RRAGAQ7L523 313 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 GPBP1Q86WP2 473 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 SERPINB13Q9UIV8 391 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 ADGRB1O14514 1584 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 RPS6KA4O75676 772 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 GPATCH4Q5T3I0 446 aaKnown RBP19.53■□□□□ 0.72
SCARB2-223ENST00000640640 FBXO11Q86XK2 927 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 VPS18Q9P253 973 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 PYCARDQ9ULZ3 195 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 PCDHA4Q9UN74 947 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 CEP83Q9Y592 693 aa19.53■□□□□ 0.72
SCARB2-223ENST00000640640 RFX7Q2KHR2 1363 aa19.52■□□□□ 0.72
SCARB2-223ENST00000640640 ERCC5P28715 1186 aaPredicted RBP19.52■□□□□ 0.72
SCARB2-223ENST00000640640 EEF2KMTQ96G04 330 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms