RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 MILR1Q7Z6M3 343 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 CACTINQ8WUQ7 758 aaKnown RBP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 STON2Q8WXE9 905 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 SGCDQ92629 289 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 LRRC45Q96CN5 670 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 CTAGE1Q96RT6 745 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 FNBP1Q96RU3 617 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 AATFQ9NY61 560 aaKnown RBP eCLIP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 LUZP4Q9P127 313 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 SASH3O75995 380 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 MBD4O95243 580 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 ZSCAN22P10073 491 aaPredicted RBP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 EIF2S2P20042 333 aaKnown RBP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 SLC16A2P36021 539 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 MLLT1Q03111 559 aaPredicted RBP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 LONRF2Q1L5Z9 754 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 RILPL1Q5EBL4 403 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 SPDYCQ5MJ68 293 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 POTEEQ6S8J3 1075 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 B4GALNT4Q76KP1 1039 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 CPXCR1Q8N123 301 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 GPR161Q8N6U8 529 aaKnown RBP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 TRIM58Q8NG06 486 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 SMARCC2Q8TAQ2 1214 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 TEKT4Q8WW24 435 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 L3MBTL2Q969R5 705 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 SLC39A13Q96H72 371 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 APBA2Q99767 749 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 SELENOOQ9BVL4 669 aa6.82□□□□□ -1.32
NECAP1-222ENST00000640072 LUC7LQ9NQ29 371 aaKnown RBP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.82□□□□□ -1.32
NECAP1-222ENST00000640072 TARBP1Q13395 1621 aaKnown RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 ABCA5Q8WWZ7 1642 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 NMT2O60551 498 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 DIAPH2O60879 1101 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 DNAJB2P25686 324 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 STT3AP46977 705 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 SHQ1Q6PI26 577 aaKnown RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 TTC39CQ8N584 583 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 PPP1R14CQ8TAE6 165 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 DTNBP1Q96EV8 351 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 FAM204AQ9H8W3 233 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 DDX21Q9NR30 783 aaKnown RBP eCLIP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 MIS18AQ9NYP9 233 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 SLC30A1Q9Y6M5 507 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 EFCAB8A8MWE9 144 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 H3BQF6 201 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 BUB1BO60566 1050 aaPredicted RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 TIPRLO75663 272 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 RHOBTB3O94955 611 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 PARP1P09874 1014 aaKnown RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 KCNA6P17658 529 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 ROR2Q01974 943 aaKnown RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 CCDC57Q2TAC2 916 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 CWF19L1Q69YN2 538 aaKnown RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 ZNF746Q6NUN9 644 aaPredicted RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 CFAP161Q6P656 301 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 DGLUCYQ7Z3D6 616 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 ZGPATQ8N5A5 531 aaKnown RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 FAM200AQ8TCP9 573 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 SCG3Q8WXD2 468 aaKnown RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 NRDE2Q9H7Z3 1164 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 MTUS1Q9ULD2 1270 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 ANGPTL3Q9Y5C1 460 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 SLC4A4Q9Y6R1 1079 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 CCDC144AA2RUR9 1427 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 PFDN1O60925 122 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 EPN2O95208 641 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 GNAT1P11488 350 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 SERPINB4P48594 390 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 FAM71BQ8TC56 605 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 BCAS4Q8TDM0 211 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 ATP6V0A1Q93050 837 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 SYTL4Q96C24 671 aaPredicted RBP6.81□□□□□ -1.32
NECAP1-222ENST00000640072 OSBPL2Q9H1P3 480 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 SNRKQ9NRH2 765 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 ABCF3Q9NUQ8 709 aa6.81□□□□□ -1.32
NECAP1-222ENST00000640072 M0QX08 132 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 PIP5K1CO60331 668 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 ZNF254O75437 659 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 TUBB4AP04350 444 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 LDHBP07195 334 aaKnown RBP6.8□□□□□ -1.32
NECAP1-222ENST00000640072 MTHFD1P11586 935 aaKnown RBP6.8□□□□□ -1.32
NECAP1-222ENST00000640072 ATP5DP30049 168 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 TPD52P55327 224 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-222ENST00000640072 TTLL12Q14166 644 aaPredicted RBP6.8□□□□□ -1.32
NECAP1-222ENST00000640072 CCDC40Q4G0X9 1142 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 WDR44Q5JSH3 913 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 METTL24Q5JXM2 366 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 RSAD2Q8WXG1 361 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 CFAP36Q96G28 342 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 RBM41Q96IZ5 413 aaKnown RBP6.8□□□□□ -1.32
NECAP1-222ENST00000640072 DBNDD1Q9H9R9 158 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 ATP6V0A4Q9HBG4 840 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 ENAMQ9NRM1 1142 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 SPDYE3A6NKU9 549 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 USP27XA6NNY8 438 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 STMND1H3BQB6 276 aa6.8□□□□□ -1.32
NECAP1-222ENST00000640072 CLASP2O75122 1294 aaKnown RBP6.8□□□□□ -1.32
NECAP1-222ENST00000640072 CDC25CP30307 473 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms