RNA–Protein interactions for RNA: ENST00000640055.1

PRICKLE1-215, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 3,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-215ENST00000640055 DDX4Q9NQI0 724 aaKnown RBP13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 IL17RBQ9NRM6 502 aa13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 POLR3EQ9NVU0 708 aa13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 FAM208AQ9UK61 1670 aaKnown RBP13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 SMTNL1A8MU46 457 aa13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 USP17L10C9JJH3 530 aa13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 CUL4BQ13620 913 aa13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 GLIPR1L2Q4G1C9 344 aa13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 METTL16Q86W50 562 aaKnown RBP13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 TMEM60Q9H2L4 133 aa13.86□□□□□ -0.19
PRICKLE1-215ENST00000640055 OFD1O75665 1012 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 ATP2B4P23634 1241 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 GH2P01242 217 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 GNG11P61952 73 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 TSR1Q2NL82 804 aaKnown RBP13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 UVSSAQ2YD98 709 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 AXDND1Q5T1B0 1012 aaPredicted RBP13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 C12orf60Q5U649 245 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 EPC1Q9H2F5 836 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 STK32BQ9NY57 414 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 SFI1A8K8P3 1242 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 MTIF2P46199 727 aaKnown RBP13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 WWC2Q6AWC2 1192 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 MNS1Q8NEH6 495 aa13.85□□□□□ -0.19
PRICKLE1-215ENST00000640055 DGKZQ13574 1117 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 CERKLQ49MI3 558 aaPredicted RBP13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 RDH13Q8NBN7 331 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 IRX2Q9BZI1 471 aaPredicted RBP13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 STRCP1A6NGW2 1772 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 FAM205AQ6ZU69 1335 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 CUTAO60888 179 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 TDP2O95551 362 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 TM4SF1P30408 202 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 GRM1Q13255 1194 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 CDAN1Q8IWY9 1227 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 TFR2Q9UP52 801 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 TEX33O43247 280 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 MRC1P22897 1456 aa13.84□□□□□ -0.19
PRICKLE1-215ENST00000640055 BBOX1O75936 387 aa13.83□□□□□ -0.19
PRICKLE1-215ENST00000640055 MATR3P43243 847 aaKnown RBP eCLIP13.83□□□□□ -0.19
PRICKLE1-215ENST00000640055 NLRP12P59046 1061 aa13.83□□□□□ -0.19
PRICKLE1-215ENST00000640055 FILIP1LQ4L180 1135 aa13.83□□□□□ -0.19
PRICKLE1-215ENST00000640055 PRR16Q569H4 304 aa13.83□□□□□ -0.19
PRICKLE1-215ENST00000640055 CEP135Q66GS9 1140 aa13.83□□□□□ -0.19
PRICKLE1-215ENST00000640055 CERS5Q8N5B7 392 aa13.83□□□□□ -0.19
PRICKLE1-215ENST00000640055 TAF1P21675 1872 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 FLT1P17948 1338 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 MRPS25P82663 173 aaKnown RBP13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 PDE4DQ08499 809 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 DLK2Q6UY11 383 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 SGMS1Q86VZ5 419 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 REXO1Q8N1G1 1221 aaKnown RBP13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 C6orf50Q9HD87 102 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 MAGEC2Q9UBF1 373 aaPredicted RBP13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 MAN1B1Q9UKM7 699 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 PCDHA1Q9Y5I3 950 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 TPM1P09493 284 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 RASA1P20936 1047 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 RNASE9P60153 205 aaKnown RBP13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 TEX35Q5T0J7 233 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 IQUBQ8NA54 791 aa13.83□□□□□ -0.2
PRICKLE1-215ENST00000640055 A0A087X0B3 334 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 CRKP46108 304 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 SLF2Q8IX21 1173 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 ECE2O60344 883 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 STAT3P40763 770 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 UBXN1Q04323 297 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 DHX40Q8IX18 779 aaKnown RBP13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 ANKRD13CQ8N6S4 541 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 PUF60Q9UHX1 559 aaKnown RBP13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 ICA1Q05084 483 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 TTLL12Q14166 644 aaPredicted RBP13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 MTF1Q14872 753 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 SNX29Q8TEQ0 813 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 PDLIM2Q96JY6 352 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 ZNF408Q9H9D4 720 aa13.82□□□□□ -0.2
PRICKLE1-215ENST00000640055 KCPQ6ZWJ8 1503 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 SHTN1A0MZ66 631 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 DDTLA6NHG4 134 aaPredicted RBP13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 MYO1BO43795 1136 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 EPS15P42566 896 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 PKN1Q16512 942 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 NCAPH2Q6IBW4 605 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 SEPT11Q9NVA2 429 aaKnown RBP13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 C5P01031 1676 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 CYTH3O43739 400 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 DLGAP5Q15398 846 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 LRRC8AQ8IWT6 810 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 ENGASEQ8NFI3 743 aa13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 TDRD7Q8NHU6 1098 aaKnown RBP13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 PRMT6Q96LA8 375 aaPredicted RBP13.81□□□□□ -0.2
PRICKLE1-215ENST00000640055 GDAP1L1Q96MZ0 367 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms