RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 PHACTR4Q8IZ21 702 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 REXO1Q8N1G1 1221 aaKnown RBP5.28□□□□□ -1.56
ATM-228ENST00000639240 SHISA4Q96DD7 197 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 KREMEN1Q96MU8 473 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 G6PC3Q9BUM1 346 aa5.28□□□□□ -1.56
ATM-228ENST00000639240 DCP1AQ9NPI6 582 aaPredicted RBP5.28□□□□□ -1.56
ATM-228ENST00000639240 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.28□□□□□ -1.56
ATM-228ENST00000639240 NPIPB6E9PJ23 425 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 MED14OSP0DP75 135 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 TNNI2P48788 182 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 TEKQ02763 1124 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 PAK2Q13177 524 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 ARSHQ5FYA8 562 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 ATG14Q6ZNE5 492 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 CCDC120Q96HB5 630 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 CCDC74BQ96LY2 380 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 PPP1R16BQ96T49 567 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 KIF2CQ99661 725 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 TRIT1Q9H3H1 467 aaKnown RBP5.27□□□□□ -1.57
ATM-228ENST00000639240 EHMT1Q9H9B1 1298 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 GPATCH2Q9NW75 528 aa5.27□□□□□ -1.57
ATM-228ENST00000639240 MYOCOSA0A1B0GUC4 107 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 UBOX5O94941 541 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 ZSCAN22P10073 491 aaPredicted RBP5.26□□□□□ -1.57
ATM-228ENST00000639240 RAG1P15918 1043 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 GBP1P32455 592 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 ANKLE2Q86XL3 938 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 PDZD8Q8NEN9 1154 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 TOX2Q96NM4 488 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 EPB41L4BQ9H329 900 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 GMIPQ9P107 970 aa5.26□□□□□ -1.57
ATM-228ENST00000639240 RAC2P15153 192 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 FBXW10Q5XX13 1052 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 OVOS1Q6IE37 1185 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 USHBP1Q8N6Y0 703 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 LINC01599Q8WXQ3 324 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 MCOLN1Q9GZU1 580 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 ACBD3Q9H3P7 528 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 ANTXR1Q9H6X2 564 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 KCNH3Q9ULD8 1083 aa5.25□□□□□ -1.57
ATM-228ENST00000639240 SMG5Q9UPR3 1016 aaKnown RBP5.25□□□□□ -1.57
ATM-228ENST00000639240 NFIBO00712 420 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 RGS13O14921 159 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 PSPNO60542 156 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 TCF3P15923 654 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 GLDCP23378 1020 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 LTKP29376 864 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 POLR2BP30876 1174 aaKnown RBP5.24□□□□□ -1.57
ATM-228ENST00000639240 CHMP4BP1P59074 171 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 RAD51AP2Q09MP3 1159 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 SNW1Q13573 536 aaKnown RBP5.24□□□□□ -1.57
ATM-228ENST00000639240 NR0B2Q15466 257 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 KCNA10Q16322 511 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 LRRFIP1Q32MZ4 808 aaKnown RBP5.24□□□□□ -1.57
ATM-228ENST00000639240 NLRC3Q7RTR2 1065 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 AMIGO3Q86WK7 504 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 SIAH1Q8IUQ4 282 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 ATG4CQ96DT6 458 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 FERD3LQ96RJ6 166 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 TGIF2Q9GZN2 237 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 PPT2Q9UMR5 302 aa5.24□□□□□ -1.57
ATM-228ENST00000639240 E9PSI1 815 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 TMEM253P0C7T8 217 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 ERCC5P28715 1186 aaPredicted RBP5.23□□□□□ -1.57
ATM-228ENST00000639240 CDCP2Q5VXM1 449 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 ZPBP2Q6X784 338 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 TMC3Q7Z5M5 1100 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 KCNN1Q92952 543 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 GPRASP2Q96D09 838 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 ASPNQ9BXN1 380 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 HDAC8Q9BY41 377 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 CCSER2Q9H7U1 834 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 CNNM2Q9H8M5 875 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 GCM1Q9NP62 436 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 GINM1Q9NU53 330 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 ZNRF3Q9ULT6 936 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 MINPP1Q9UNW1 487 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 EFR3BQ9Y2G0 817 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 INPP5FQ9Y2H2 1132 aa5.23□□□□□ -1.57
ATM-228ENST00000639240 YBX2Q9Y2T7 364 aaKnown RBP5.23□□□□□ -1.57
ATM-228ENST00000639240 TMEM82A0PJX8 343 aa5.22□□□□□ -1.57
ATM-228ENST00000639240 IMPDH2P12268 514 aa5.22□□□□□ -1.57
ATM-228ENST00000639240 NME1P15531 152 aaKnown RBP5.22□□□□□ -1.57
ATM-228ENST00000639240 CEBPAP49715 358 aaPredicted RBP5.22□□□□□ -1.57
ATM-228ENST00000639240 CCDC81Q6ZN84 652 aa5.22□□□□□ -1.57
ATM-228ENST00000639240 ZSCAN18Q8TBC5 510 aaPredicted RBP5.22□□□□□ -1.57
ATM-228ENST00000639240 INTS4Q96HW7 963 aaKnown RBP5.22□□□□□ -1.57
ATM-228ENST00000639240 SPATA32Q96LK8 384 aa5.22□□□□□ -1.57
ATM-228ENST00000639240 SGPP1Q9BX95 441 aa5.22□□□□□ -1.57
ATM-228ENST00000639240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.22□□□□□ -1.57
ATM-228ENST00000639240 FITM1A5D6W6 292 aa5.21□□□□□ -1.58
ATM-228ENST00000639240 FAM86C2PA6NEL3 165 aa5.21□□□□□ -1.58
ATM-228ENST00000639240 MEIS3P2A8K0S8 358 aa5.21□□□□□ -1.58
ATM-228ENST00000639240 GJA8P48165 433 aa5.21□□□□□ -1.58
ATM-228ENST00000639240 LINC00310P59036 64 aa5.21□□□□□ -1.58
ATM-228ENST00000639240 NMIQ13287 307 aaPredicted RBP5.21□□□□□ -1.58
ATM-228ENST00000639240 COL9A2Q14055 689 aaPredicted RBP5.21□□□□□ -1.58
ATM-228ENST00000639240 NBPF12Q5TAG4 269 aaPredicted RBP5.21□□□□□ -1.58
ATM-228ENST00000639240 TTLL10Q6ZVT0 673 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms