RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ARHGEF6Q15052 776 aa25.72■■□□□ 1.71
SCN1B-206ENST00000638536 GMCL1P1Q8NEA9 526 aa25.72■■□□□ 1.71
SCN1B-206ENST00000638536 HOXC10Q9NYD6 342 aa25.72■■□□□ 1.71
SCN1B-206ENST00000638536 ZSWIM5Q9P217 1185 aa25.72■■□□□ 1.71
SCN1B-206ENST00000638536 U3KPZ7 1027 aaPredicted RBP25.72■■□□□ 1.71
SCN1B-206ENST00000638536 KIAA0100Q14667 2235 aaKnown RBP25.71■■□□□ 1.71
SCN1B-206ENST00000638536 TNPO2O14787 897 aaKnown RBP25.71■■□□□ 1.71
SCN1B-206ENST00000638536 CDC45O75419 566 aa25.71■■□□□ 1.71
SCN1B-206ENST00000638536 SLFN13Q68D06 897 aa25.71■■□□□ 1.71
SCN1B-206ENST00000638536 ESR2Q92731 530 aa25.71■■□□□ 1.71
SCN1B-206ENST00000638536 MYPNQ86TC9 1320 aa25.71■■□□□ 1.71
SCN1B-206ENST00000638536 GNRH1P01148 92 aa25.7■■□□□ 1.71
SCN1B-206ENST00000638536 STOX1Q6ZVD7 989 aa25.7■■□□□ 1.71
SCN1B-206ENST00000638536 TMEM47Q9BQJ4 181 aa25.7■■□□□ 1.71
SCN1B-206ENST00000638536 MTMR7Q9Y216 660 aa25.7■■□□□ 1.71
SCN1B-206ENST00000638536 CCDC85CA6NKD9 419 aa25.7■■□□□ 1.7
SCN1B-206ENST00000638536 MCCP23508 829 aa25.7■■□□□ 1.7
SCN1B-206ENST00000638536 IFFO2Q5TF58 517 aa25.7■■□□□ 1.7
SCN1B-206ENST00000638536 GTF3C2Q8WUA4 911 aaPredicted RBP25.7■■□□□ 1.7
SCN1B-206ENST00000638536 SYNPO2Q9UMS6 1093 aa25.7■■□□□ 1.7
SCN1B-206ENST00000638536 ADAMTS5Q9UNA0 930 aa25.7■■□□□ 1.7
SCN1B-206ENST00000638536 FLT3LGP49771 235 aa25.69■■□□□ 1.7
SCN1B-206ENST00000638536 KIAA1211Q6ZU35 1233 aa25.69■■□□□ 1.7
SCN1B-206ENST00000638536 CYB5R4Q7L1T6 521 aa25.69■■□□□ 1.7
SCN1B-206ENST00000638536 ANO2Q9NQ90 1003 aa25.69■■□□□ 1.7
SCN1B-206ENST00000638536 PPP1R9AQ9ULJ8 1098 aa25.69■■□□□ 1.7
SCN1B-206ENST00000638536 COL9A3Q14050 684 aaPredicted RBP25.68■■□□□ 1.7
SCN1B-206ENST00000638536 GJD2Q9UKL4 321 aa25.68■■□□□ 1.7
SCN1B-206ENST00000638536 MKI67P46013 3256 aaKnown RBP25.68■■□□□ 1.7
SCN1B-206ENST00000638536 E7EWF7 191 aa25.67■■□□□ 1.7
SCN1B-206ENST00000638536 HOXD10P28358 340 aa25.67■■□□□ 1.7
SCN1B-206ENST00000638536 TMEM132BQ14DG7 1078 aa25.67■■□□□ 1.7
SCN1B-206ENST00000638536 SH3TC2Q8TF17 1288 aa25.67■■□□□ 1.7
SCN1B-206ENST00000638536 BMP3P12645 472 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 KCTD1Q719H9 257 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 SMCHD1A6NHR9 2005 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 VWA5AO00534 786 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 TOP1P11387 765 aaKnown RBP25.66■■□□□ 1.7
SCN1B-206ENST00000638536 PPP4R3BQ5MIZ7 849 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 GPR142Q7Z601 462 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 REPS2Q8NFH8 660 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 COA7Q96BR5 231 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 GMCL1Q96IK5 515 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 SLF1Q9BQI6 1058 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 MOV10L1Q9BXT6 1211 aaKnown RBP25.66■■□□□ 1.7
SCN1B-206ENST00000638536 KRT23Q9C075 422 aa25.66■■□□□ 1.7
SCN1B-206ENST00000638536 ZNFX1Q9P2E3 1918 aaKnown RBP25.66■■□□□ 1.7
SCN1B-206ENST00000638536 TMEM232C9JQI7 657 aa25.65■■□□□ 1.7
SCN1B-206ENST00000638536 PRMT2P55345 433 aa25.65■■□□□ 1.7
SCN1B-206ENST00000638536 NECTIN1Q15223 517 aa25.65■■□□□ 1.7
SCN1B-206ENST00000638536 ENAHQ8N8S7 591 aaPredicted RBP25.65■■□□□ 1.7
SCN1B-206ENST00000638536 RAET1EQ8TD07 263 aa25.65■■□□□ 1.7
SCN1B-206ENST00000638536 TTC14Q96N46 770 aa25.65■■□□□ 1.7
SCN1B-206ENST00000638536 ZSCAN10Q96SZ4 725 aaPredicted RBP25.65■■□□□ 1.7
SCN1B-206ENST00000638536 SPATC1LQ9H0A9 340 aa25.65■■□□□ 1.7
SCN1B-206ENST00000638536 CNNM2Q9H8M5 875 aa25.65■■□□□ 1.7
SCN1B-206ENST00000638536 SLC27A2O14975 620 aa25.64■■□□□ 1.7
SCN1B-206ENST00000638536 SLC1A4P43007 532 aa25.64■■□□□ 1.7
SCN1B-206ENST00000638536 PLS1Q14651 629 aa25.64■■□□□ 1.7
SCN1B-206ENST00000638536 KIFC2Q96AC6 838 aa25.64■■□□□ 1.7
SCN1B-206ENST00000638536 MAPK4P31152 587 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 SLC9C1Q4G0N8 1177 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 CHST3Q7LGC8 479 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 MB21D1Q8N884 522 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 ZNF214Q9UL59 606 aaPredicted RBP25.63■■□□□ 1.69
SCN1B-206ENST00000638536 ISY1Q9ULR0 285 aaKnown RBP25.63■■□□□ 1.69
SCN1B-206ENST00000638536 ELNP15502 786 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 WDR78Q5VTH9 848 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 CREB3L3Q68CJ9 461 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 TTBK2Q6IQ55 1244 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 CASC1Q6TDU7 716 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 IQCA1Q86XH1 822 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 DGKHQ86XP1 1220 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 PRPF38AQ8NAV1 312 aaKnown RBP25.63■■□□□ 1.69
SCN1B-206ENST00000638536 FEM1BQ9UK73 627 aa25.63■■□□□ 1.69
SCN1B-206ENST00000638536 TNKSO95271 1327 aa25.62■■□□□ 1.69
SCN1B-206ENST00000638536 MYCP01106 439 aaPredicted RBP25.62■■□□□ 1.69
SCN1B-206ENST00000638536 PLEKHH3Q7Z736 793 aa25.62■■□□□ 1.69
SCN1B-206ENST00000638536 ARMC5Q96C12 935 aa25.62■■□□□ 1.69
SCN1B-206ENST00000638536 ERCC3P19447 782 aa25.61■■□□□ 1.69
SCN1B-206ENST00000638536 GRK4P32298 578 aa25.61■■□□□ 1.69
SCN1B-206ENST00000638536 CCNA1P78396 465 aa25.61■■□□□ 1.69
SCN1B-206ENST00000638536 SEC23AQ15436 765 aa25.61■■□□□ 1.69
SCN1B-206ENST00000638536 FRMPD2Q68DX3 1309 aaPredicted RBP25.61■■□□□ 1.69
SCN1B-206ENST00000638536 CCAR1Q8IX12 1150 aaKnown RBP25.61■■□□□ 1.69
SCN1B-206ENST00000638536 ANKS1AQ92625 1134 aa25.61■■□□□ 1.69
SCN1B-206ENST00000638536 ZNF333Q96JL9 665 aa25.61■■□□□ 1.69
SCN1B-206ENST00000638536 SENP2Q9HC62 589 aa25.61■■□□□ 1.69
SCN1B-206ENST00000638536 ADCY3O60266 1144 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 PDHBP11177 359 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 ANTXR2P58335 489 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 TRDNQ13061 729 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 IRF5Q13568 498 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 MORN1Q5T089 497 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 NCOA7Q8NI08 942 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 USP6NLQ92738 828 aa25.6■■□□□ 1.69
SCN1B-206ENST00000638536 CYP2B6P20813 491 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 SLC16A2P36021 539 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 NT5C2P49902 561 aa25.59■■□□□ 1.69
SCN1B-206ENST00000638536 STAT2P52630 851 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms