RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 SLFN13Q68D06 897 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 RAET1EQ8TD07 263 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 CTNNA3Q9UI47 895 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 RABGAP1Q9Y3P9 1069 aa14.79□□□□□ -0.04
CLN6-225ENST00000638144 CYP21A2P08686 494 aa14.78□□□□□ -0.04
CLN6-225ENST00000638144 ELNP15502 786 aa14.78□□□□□ -0.04
CLN6-225ENST00000638144 LBX2Q6XYB7 198 aa14.78□□□□□ -0.04
CLN6-225ENST00000638144 CCAR1Q8IX12 1150 aaKnown RBP14.78□□□□□ -0.04
CLN6-225ENST00000638144 GTF3C2Q8WUA4 911 aaPredicted RBP14.78□□□□□ -0.04
CLN6-225ENST00000638144 MKL1Q969V6 931 aa14.78□□□□□ -0.04
CLN6-225ENST00000638144 COA7Q96BR5 231 aa14.78□□□□□ -0.04
CLN6-225ENST00000638144 RNF41Q9H4P4 317 aaPredicted RBP14.78□□□□□ -0.04
CLN6-225ENST00000638144 RBM8AQ9Y5S9 174 aaKnown RBP14.78□□□□□ -0.04
CLN6-225ENST00000638144 CDC45O75419 566 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 GNRH1P01148 92 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 MCCP23508 829 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 HOXD10P28358 340 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 KCTD1Q719H9 257 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 GMCL1P1Q8NEA9 526 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 ESR2Q92731 530 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 SLF1Q9BQI6 1058 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 LSG1Q9H089 658 aaKnown RBP14.77□□□□□ -0.05
CLN6-225ENST00000638144 CWC22Q9HCG8 908 aaKnown RBP14.77□□□□□ -0.05
CLN6-225ENST00000638144 ANO2Q9NQ90 1003 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 HOXC10Q9NYD6 342 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
CLN6-225ENST00000638144 BRCA2P51587 3418 aa14.77□□□□□ -0.05
CLN6-225ENST00000638144 TMEM232C9JQI7 657 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 TMEM132BQ14DG7 1078 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 CCDC96Q2M329 555 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 RCSD1Q6JBY9 416 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 STOX1Q6ZVD7 989 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 GPR142Q7Z601 462 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 KIFC2Q96AC6 838 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 TMEM47Q9BQJ4 181 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 MOV10L1Q9BXT6 1211 aaKnown RBP14.76□□□□□ -0.05
CLN6-225ENST00000638144 SPATC1LQ9H0A9 340 aa14.76□□□□□ -0.05
CLN6-225ENST00000638144 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
CLN6-225ENST00000638144 VWA5AO00534 786 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 ADCY3O60266 1144 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 PCP11498 1178 aaKnown RBP14.75□□□□□ -0.05
CLN6-225ENST00000638144 BMP3P12645 472 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 CYP2B6P20813 491 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 MAPK4P31152 587 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 GRK4P32298 578 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 SLC1A4P43007 532 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 SLC4A3P48751 1232 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 PRMT2P55345 433 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 SNAP25P60880 206 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 CCNA1P78396 465 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 IKQ13123 557 aaPredicted RBP14.75□□□□□ -0.05
CLN6-225ENST00000638144 MTFR1Q15390 333 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 ERICH6BQ5W0A0 696 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 CYB5R4Q7L1T6 521 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 PLEKHH3Q7Z736 793 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 MAP4K1Q92918 833 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 ARMC5Q96C12 935 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 ZNF333Q96JL9 665 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 BIN2Q9UBW5 565 aaPredicted RBP14.75□□□□□ -0.05
CLN6-225ENST00000638144 GJD2Q9UKL4 321 aa14.75□□□□□ -0.05
CLN6-225ENST00000638144 TOP1P11387 765 aaKnown RBP14.74□□□□□ -0.05
CLN6-225ENST00000638144 TAL1P17542 331 aaPredicted RBP14.74□□□□□ -0.05
CLN6-225ENST00000638144 ERCC3P19447 782 aa14.74□□□□□ -0.05
CLN6-225ENST00000638144 NOVP48745 357 aa14.74□□□□□ -0.05
CLN6-225ENST00000638144 NCAPG2Q86XI2 1143 aa14.74□□□□□ -0.05
CLN6-225ENST00000638144 KRT23Q9C075 422 aa14.74□□□□□ -0.05
CLN6-225ENST00000638144 TCP11L1Q9NUJ3 509 aa14.74□□□□□ -0.05
CLN6-225ENST00000638144 ZSWIM5Q9P217 1185 aa14.74□□□□□ -0.05
CLN6-225ENST00000638144 TNKSO95271 1327 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 ZNFX1Q9P2E3 1918 aaKnown RBP14.73□□□□□ -0.05
CLN6-225ENST00000638144 POTEFA5A3E0 1075 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 E7EWF7 191 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 TRIM32Q13049 653 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 COL9A3Q14050 684 aaPredicted RBP14.73□□□□□ -0.05
CLN6-225ENST00000638144 PPP4R3BQ5MIZ7 849 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 TTBK2Q6IQ55 1244 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 CHST3Q7LGC8 479 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 CPXCR1Q8N123 301 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 MB21D1Q8N884 522 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 ENAHQ8N8S7 591 aaPredicted RBP14.73□□□□□ -0.05
CLN6-225ENST00000638144 REPS2Q8NFH8 660 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 GMCL1Q96IK5 515 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 ZSCAN10Q96SZ4 725 aaPredicted RBP14.73□□□□□ -0.05
CLN6-225ENST00000638144 GPCPD1Q9NPB8 672 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 ZNF214Q9UL59 606 aaPredicted RBP14.73□□□□□ -0.05
CLN6-225ENST00000638144 SYNPO2Q9UMS6 1093 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 ADAMTS5Q9UNA0 930 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 SMCHD1A6NHR9 2005 aa14.73□□□□□ -0.05
CLN6-225ENST00000638144 RBBP6Q7Z6E9 1792 aaKnown RBP14.73□□□□□ -0.05
CLN6-225ENST00000638144 INHAP05111 366 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 GOLGA8HP0CJ92 632 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 SLC16A2P36021 539 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 STAT2P52630 851 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 CCL14Q16627 93 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 MORN1Q5T089 497 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 SNRNP48Q6IEG0 339 aaKnown RBP14.72□□□□□ -0.05
CLN6-225ENST00000638144 CASC1Q6TDU7 716 aa14.72□□□□□ -0.05
CLN6-225ENST00000638144 IQCA1Q86XH1 822 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms