RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 TNS1Q9HBL0 1735 aaKnown RBP17.54■□□□□ 0.4
SCN8A-214ENST00000637709 C21orf2O43822 256 aa17.54■□□□□ 0.4
SCN8A-214ENST00000637709 ECE2O60344 883 aa17.54■□□□□ 0.4
SCN8A-214ENST00000637709 SMC2O95347 1197 aa17.54■□□□□ 0.4
SCN8A-214ENST00000637709 INF2Q27J81 1249 aa17.54■□□□□ 0.4
SCN8A-214ENST00000637709 SLF2Q8IX21 1173 aa17.54■□□□□ 0.4
SCN8A-214ENST00000637709 TRMT44Q8IYL2 757 aaKnown RBP17.54■□□□□ 0.4
SCN8A-214ENST00000637709 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 BLIDQ8IZY5 108 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 FAM163AQ96GL9 167 aaPredicted RBP17.53■□□□□ 0.4
SCN8A-214ENST00000637709 PLIN2Q99541 437 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 NAT10Q9H0A0 1025 aaKnown RBP17.53■□□□□ 0.4
SCN8A-214ENST00000637709 GPCPD1Q9NPB8 672 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 PP2D1A8MPX8 630 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 CRKP46108 304 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 NCAPHQ15003 741 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 POSTNQ15063 836 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 SLC15A2Q16348 729 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 SMYD4Q8IYR2 804 aaPredicted RBP17.53■□□□□ 0.4
SCN8A-214ENST00000637709 NEDD1Q8NHV4 660 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 PIGSQ96S52 555 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 IFNKQ9P0W0 207 aa17.53■□□□□ 0.4
SCN8A-214ENST00000637709 PALM3A6NDB9 673 aaPredicted RBP17.52■□□□□ 0.4
SCN8A-214ENST00000637709 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.4
SCN8A-214ENST00000637709 MDM2Q00987 491 aaPredicted RBP17.52■□□□□ 0.4
SCN8A-214ENST00000637709 CACTINQ8WUQ7 758 aaKnown RBP17.52■□□□□ 0.4
SCN8A-214ENST00000637709 TEKT1Q969V4 418 aa17.52■□□□□ 0.4
SCN8A-214ENST00000637709 ACTN4O43707 911 aaKnown RBP17.52■□□□□ 0.39
SCN8A-214ENST00000637709 NOLC1Q14978 699 aaKnown RBP eCLIP17.52■□□□□ 0.39
SCN8A-214ENST00000637709 TMC4Q7Z404 712 aa17.52■□□□□ 0.39
SCN8A-214ENST00000637709 ZSCAN29Q8IWY8 852 aaPredicted RBP17.52■□□□□ 0.39
SCN8A-214ENST00000637709 UIMC1Q96RL1 719 aa17.52■□□□□ 0.39
SCN8A-214ENST00000637709 XPO4Q9C0E2 1151 aaKnown RBP17.52■□□□□ 0.39
SCN8A-214ENST00000637709 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.39
SCN8A-214ENST00000637709 OFD1O75665 1012 aa17.51■□□□□ 0.39
SCN8A-214ENST00000637709 SLC16A2P36021 539 aa17.51■□□□□ 0.39
SCN8A-214ENST00000637709 RGS22Q8NE09 1264 aa17.51■□□□□ 0.39
SCN8A-214ENST00000637709 TIGD1Q96MW7 591 aa17.51■□□□□ 0.39
SCN8A-214ENST00000637709 HSD3B7Q9H2F3 369 aa17.51■□□□□ 0.39
SCN8A-214ENST00000637709 BLZF1Q9H2G9 400 aa17.51■□□□□ 0.39
SCN8A-214ENST00000637709 TUBE1Q9UJT0 475 aa17.51■□□□□ 0.39
SCN8A-214ENST00000637709 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
SCN8A-214ENST00000637709 STXBP3O00186 592 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 SERPINB13Q9UIV8 391 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 MAN1B1Q9UKM7 699 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 PCDHA6Q9UN73 950 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 SCAF8Q9UPN6 1271 aaKnown RBP17.5■□□□□ 0.39
SCN8A-214ENST00000637709 PCDHA8Q9Y5H6 950 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 FAM237AA0A1B0GTK4 181 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 NAPAP54920 295 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 TTBK2Q6IQ55 1244 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 ANKS1AQ92625 1134 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 DPF2Q92785 391 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 COA7Q96BR5 231 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 OSBPL5Q9H0X9 879 aaPredicted RBP17.5■□□□□ 0.39
SCN8A-214ENST00000637709 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 ZNF287Q9HBT7 754 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 TCP11L1Q9NUJ3 509 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 PCDHA4Q9UN74 947 aa17.5■□□□□ 0.39
SCN8A-214ENST00000637709 GOLGA6L6A8MZA4 724 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 CAVIN2O95810 425 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 SHMT1P34896 483 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 FMR1Q06787 632 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCN8A-214ENST00000637709 KCTD1Q719H9 257 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 DNAJC18Q9H819 358 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 TMEM260Q9NX78 707 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 MTMR4Q9NYA4 1195 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 CCDC194A0A1B0GVG4 234 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 PDHBP11177 359 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 GABPAQ06546 454 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 KLHL10Q6JEL2 608 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 FANCLQ9NW38 375 aa17.49■□□□□ 0.39
SCN8A-214ENST00000637709 BIN2Q9UBW5 565 aaPredicted RBP17.49■□□□□ 0.39
SCN8A-214ENST00000637709 TOP1P11387 765 aaKnown RBP17.48■□□□□ 0.39
SCN8A-214ENST00000637709 GOLGA8FQ08AF8 430 aa17.48■□□□□ 0.39
SCN8A-214ENST00000637709 GOLGA8DPQ0D2H9 430 aa17.48■□□□□ 0.39
SCN8A-214ENST00000637709 JAKMIP3Q5VZ66 844 aa17.48■□□□□ 0.39
SCN8A-214ENST00000637709 TMED8Q6PL24 325 aaPredicted RBP17.48■□□□□ 0.39
SCN8A-214ENST00000637709 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
SCN8A-214ENST00000637709 BARHL2Q9NY43 387 aa17.48■□□□□ 0.39
SCN8A-214ENST00000637709 ATP2C1P98194 919 aaPredicted RBP17.48■□□□□ 0.39
SCN8A-214ENST00000637709 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
SCN8A-214ENST00000637709 CAMKK2Q96RR4 588 aa17.48■□□□□ 0.39
SCN8A-214ENST00000637709 MYH4Q9Y623 1939 aa17.48■□□□□ 0.39
SCN8A-214ENST00000637709 GDF11O95390 407 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 STX17P56962 302 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 SARM1Q6SZW1 724 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 KIAA1524Q8TCG1 905 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 SMCO2A6NFE2 343 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 YDJCA8MPS7 323 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 ZBTB22O15209 634 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 TAL1P17542 331 aaPredicted RBP17.47■□□□□ 0.39
SCN8A-214ENST00000637709 LETM2Q2VYF4 491 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 SMARCE1Q969G3 411 aa17.47■□□□□ 0.39
SCN8A-214ENST00000637709 PPIP5K2O43314 1243 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 RAD17O75943 681 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 SNAP25P60880 206 aa17.46■□□□□ 0.39
SCN8A-214ENST00000637709 KARSQ15046 597 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms