RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, human

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNGAP1-223	ENST00000637671	TMEM57	Q8N5G2	664 aa		14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	USP38	Q8NB14	1042 aa		14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	EAF2	Q96CJ1	260 aa	Predicted RBP	14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	GAS2L1	Q99501	681 aa	Predicted RBP	14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	TINF2	Q9BSI4	451 aa		14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	ZNF576	Q9H609	170 aa		14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	ANTXR1	Q9H6X2	564 aa		14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	STARD7	Q9NQZ5	370 aa		14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	TNN	Q9UQP3	1299 aa		14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	DIS3	Q9Y2L1	958 aa	Known RBP	14.21	□□□□□ -0.13
SYNGAP1-223	ENST00000637671	MYO5A	Q9Y4I1	1855 aa	Known RBP	14.21	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PGK2	P07205	417 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TMEM132B	Q14DG7	1078 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	SLC9C2	Q5TAH2	1124 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ANKRD33	Q7Z3H0	272 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	AACS	Q86V21	672 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	SLC44A5	Q8NCS7	719 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TOX2	Q96NM4	488 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TSEN34	Q9BSV6	310 aa	Known RBP	14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	C1orf115	Q9H7X2	142 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	VCPKMT	Q9H867	229 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TMX2	Q9Y320	296 aa		14.2	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	MROH7	Q68CQ1	1323 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	NAV1	Q8NEY1	1877 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	MOXD2P	A6NHM9	499 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PDE6A	P16499	860 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ACLY	P53396	1101 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	FAAP100	Q0VG06	881 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PPIG	Q13427	754 aa	Known RBP eCLIP	14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	KIAA1755	Q5JYT7	1200 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ZKSCAN2	Q63HK3	967 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	CCDC129	Q6ZRS4	1044 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ERC1	Q8IUD2	1116 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	RIOX2	Q8IUF8	465 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	AMOTL1	Q8IY63	956 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	FTSJ3	Q8IY81	847 aa	Known RBP	14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	IL27	Q8NEV9	243 aa		14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ATXN2L	Q8WWM7	1075 aa	Known RBP	14.19	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TIMP1	P01033	207 aa		14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TAL1	P17542	331 aa	Predicted RBP	14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ZNF792	Q3KQV3	632 aa		14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	CLEC10A	Q8IUN9	316 aa		14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	MSL3	Q8N5Y2	521 aa	Known RBP	14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	CCDC17	Q96LX7	622 aa		14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	GOPC	Q9HD26	462 aa		14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	DCP1A	Q9NPI6	582 aa	Predicted RBP	14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	THEG	Q9P2T0	379 aa		14.18	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	SYNRG	Q9UMZ2	1314 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	VWA5A	O00534	786 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	RAD21	O60216	631 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ADAMTS4	O75173	837 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ZNF865	P0CJ78	1059 aa	Predicted RBP	14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	CYP2D6	P10635	497 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	AKR1B1	P15121	316 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	STAT3	P40763	770 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	EVX2	Q03828	476 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	AKNAD1	Q5T1N1	836 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	SDR42E1	Q8WUS8	393 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PPM1E	Q8WY54	764 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	LENG1	Q96BZ8	264 aa	Predicted RBP	14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	DYNLL2	Q96FJ2	89 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	DDRGK1	Q96HY6	314 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	GLT1D1	Q96MS3	346 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	FAM184B	Q9ULE4	1060 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ADAMTS5	Q9UNA0	930 aa		14.17	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ZNF532	Q9HCE3	1301 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	MFSD5	Q6N075	450 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	SIAH1	Q8IUQ4	282 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ITPRIP	Q8IWB1	547 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	LCORL	Q8N3X6	602 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TMEM199	Q8N511	208 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	SPC25	Q9HBM1	224 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ZHX1	Q9UKY1	873 aa	Predicted RBP	14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TBX21	Q9UL17	535 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PPP1R9A	Q9ULJ8	1098 aa		14.16	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	SYNGAP1	Q96PV0	1343 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	APBB1	O00213	710 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	MRPS5	P82675	430 aa	Known RBP	14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	RAB30	Q15771	203 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	KCNA10	Q16322	511 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	HSP90AB4P	Q58FF6	505 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PSRC1	Q6PGN9	363 aa	Predicted RBP	14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PCSK9	Q8NBP7	692 aa	Known RBP	14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ADAMTS19	Q8TE59	1207 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	VTI1A	Q96AJ9	217 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ASB2	Q96Q27	587 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	DNAJC2	Q99543	621 aa	Known RBP	14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	TEX13B	Q9BXU2	312 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PBX4	Q9BYU1	374 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	MTIF3	Q9H2K0	278 aa	Known RBP	14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	PRDM12	Q9H4Q4	367 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	KANSL2	Q9H9L4	492 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ATP8A2	Q9NTI2	1148 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	FBXO28	Q9NVF7	368 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	MSRA	Q9UJ68	235 aa		14.15	□□□□□ -0.14
SYNGAP1-223	ENST00000637671	ELP1	O95163	1332 aa		14.15	□□□□□ -0.15
SYNGAP1-223	ENST00000637671	GOLIM4	O00461	696 aa		14.14	□□□□□ -0.15
SYNGAP1-223	ENST00000637671	DUSP11	O75319	330 aa	Known RBP	14.14	□□□□□ -0.15
SYNGAP1-223	ENST00000637671	C6orf222	P0C671	652 aa	Predicted RBP	14.14	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms