RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 SPATA31A3Q5VYP0 1347 aa22.74■■□□□ 1.23
CACNA1A-243ENST00000637616 PRCPP42785 496 aa22.74■■□□□ 1.23
CACNA1A-243ENST00000637616 HERVK_113P62684 666 aa22.74■■□□□ 1.23
CACNA1A-243ENST00000637616 GNL3LQ9NVN8 582 aaKnown RBP22.74■■□□□ 1.23
CACNA1A-243ENST00000637616 SEMA3EO15041 775 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 PMS1P54277 932 aaKnown RBP22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 PPARAQ07869 468 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 PUM3Q15397 648 aaKnown RBP22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 PIK3AP1Q6ZUJ8 805 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 LPIN2Q92539 896 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 MED4Q9NPJ6 270 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 SAR1BQ9Y6B6 198 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 KCPQ6ZWJ8 1503 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 RCCD1A6NED2 376 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 LRRC10BA6NIK2 292 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 GIGYF2Q6Y7W6 1299 aaKnown RBP22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 ADGRA1Q86SQ6 560 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 EHD4Q9H223 541 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 ACBD3Q9H3P7 528 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 RPS6KA5O75582 802 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 XBP1P17861 261 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 LACRTQ9GZZ8 138 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 LRP2BPQ9P2M1 347 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 RWDD2AQ9UIY3 292 aa22.73■■□□□ 1.23
CACNA1A-243ENST00000637616 WDR17Q8IZU2 1322 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 PRPF6O94906 941 aaKnown RBP22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 MAGEA9P43362 315 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 E2F4Q16254 413 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 TTC31Q49AM3 519 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 IRF2BP1Q8IU81 584 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 RNF26Q9BY78 433 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 MYO1AQ9UBC5 1043 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 PDE2AO00408 941 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 KLK7P49862 253 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 FKBP15Q5T1M5 1219 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 WDR59Q6PJI9 974 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 ENAHQ8N8S7 591 aaPredicted RBP22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 CAGE1Q8TC20 777 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 FERMT2Q96AC1 680 aa22.72■■□□□ 1.23
CACNA1A-243ENST00000637616 CYP27A1Q02318 531 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 EVX2Q03828 476 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 STIM1Q13586 685 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 TTC19Q6DKK2 380 aaPredicted RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 CTR9Q6PD62 1173 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 MSL3Q8N5Y2 521 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 ANKRD20A12PQ8NF67 263 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 MKRN1Q9UHC7 482 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 LUC7L2Q9Y383 392 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 SOS2Q07890 1332 aaPredicted RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 MACROD2A1Z1Q3 448 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 PARP1P09874 1014 aaKnown RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 TUBB4BP68371 445 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 C2orf54Q08AI8 447 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 CT47A1Q5JQC4 288 aaPredicted RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 PDXDC2PQ6P474 469 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 KIAA1328Q86T90 577 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 OR8K1Q8NGG5 319 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 SMARCC1Q92922 1105 aaPredicted RBP22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 EFCC1Q9HA90 598 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 AGPAT5Q9NUQ2 364 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 ABCF2Q9UG63 623 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 SEC23AQ15436 765 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 TMTC2Q8N394 836 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 JAKMIP2Q96AA8 810 aa22.71■■□□□ 1.23
CACNA1A-243ENST00000637616 RPN1P04843 607 aaKnown RBP22.7■■□□□ 1.22
CACNA1A-243ENST00000637616 ATF3P18847 181 aa22.7■■□□□ 1.22
CACNA1A-243ENST00000637616 FUT2Q10981 343 aa22.7■■□□□ 1.22
CACNA1A-243ENST00000637616 NPY5RQ15761 445 aa22.7■■□□□ 1.22
CACNA1A-243ENST00000637616 TMOD3Q9NYL9 352 aa22.7■■□□□ 1.22
CACNA1A-243ENST00000637616 LRP6O75581 1613 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 ZC3H4Q9UPT8 1303 aaKnown RBP22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 FGFR2P21802 821 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 COG1Q8WTW3 980 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 JADE2Q9NQC1 790 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 PSMD14O00487 310 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 CORO7P57737 925 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 EZH2Q15910 746 aaKnown RBP22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 MB21D1Q8N884 522 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 SMCR8Q8TEV9 937 aaPredicted RBP22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 DRC1Q96MC2 740 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 PRDM11Q9NQV5 511 aa22.69■■□□□ 1.22
CACNA1A-243ENST00000637616 PP2D1A8MPX8 630 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 NMT2O60551 498 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 CYP7A1P22680 504 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 IFIT1BQ5T764 474 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 CRACR2AQ9BSW2 395 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 SELENOOQ9BVL4 669 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 AGPSO00116 658 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 SLC5A1P13866 664 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 ATP2C1P98194 919 aaPredicted RBP22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 ZNF658Q5TYW1 1059 aaPredicted RBP22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 HDAC7Q8WUI4 952 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 HAUS4Q9H6D7 363 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 NID2Q14112 1375 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 WTIPA6NIX2 430 aaPredicted RBP22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 B4DLN1 442 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 PPFIA4O75335 1185 aa22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 MATR3P43243 847 aaKnown RBP eCLIP22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 DNAJC21Q5F1R6 531 aaKnown RBP22.68■■□□□ 1.22
CACNA1A-243ENST00000637616 ESR2Q92731 530 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms